Gene Information

Name : yejF3 (USDA257_c59800)
Accession : YP_006401241.1
Strain : Sinorhizobium fredii USDA 257
Genome accession: NC_018000
Putative virulence/resistance : Unknown
Product : ABC transporter ATP-binding protein YejF
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6235418 - 6237046 bp
Length : 1629 bp
Strand : -
Note : -

DNA sequence :
ATGACAGACACCCTCCTCTCCGTGCGCGATCTCTCCGTCGCCTTCCATCAGGGCGGCGACACGTCCATCGCCGTCGACCA
CATCTCGTTCGACATCAAGCGCGGCGAAACGGTTGCGCTTGTCGGCGAGTCCGGTTCGGGCAAATCGGTCACGGCGAACT
CGATCCTGAAGCTACTGCCCTACCCGGCCGCCAGCCACCCGAGCGGCGAGATCCTCTTCAACGGCAAGGAACTGCTGAAG
GCGAGCGATGCCGAGCTGCGCCACGTTCGCGGCAACGACATCACGATGATCTTCCAGGAGCCGATGACGTCGCTCAATCC
GCTGCACACGATCGAACAGCAGATCGGCGAGATTCTCGAGCTTCACCAGGGCATCGAGGGCGCTGCGGCGCGCGCGAAAA
CGCTGGAGCTCCTCGATCAGGTCGGCATCCGCGAAGCGGAGAAGCGGCTCGGCGCCTATCCGCACCAGCTTTCCGGCGGC
CAGCGTCAGCGCGTGATGATCGCCATGGCGCTTGCCAACCGTCCGGAACTCTTGATCGCCGACGAACCGACGACGGCGCT
CGACGTCACCGTGCAGGCACAGATCCTCGAGCTTCTGAAAGCACTCAAGGACCAGCACGGCATGTCCATGCTGTTTATCA
CCCACGACCTCGGCATTGTCCGCAAGATCGCCGACCGGGTCTGCGTGATGACCAAGGGCAAAATTGTAGAGACCGGCCCG
ACGGCGGAAATCTTCGCCAACCCCCAGCACGCCTATACGCGGCACCTGCTCGCCTCCGAGCCTAAGGGGGAGCCGCCGGC
TTCCGATGCATCGAAGCCGATCGTCATCGAAGGGAAGGACGTGAAGGTCTGGTTTCCGATCAAGGCCGGTTTCCTGCGTC
GCGTCGTCGACCATGTGAAGGCGGTGGACGGCATCGATCTTACGCTTCGCGCCGGGCAGACGCTGGGCGTCGTCGGCGAA
TCCGGCTCGGGCAAGACGACGCTCGGTCTGGCGCTGACGCGGCTGATCTCGTCAAAGGGACGGATCGCGTTCATCGGCCA
GAATATCGACGCCTATAGTTTCGGCGAGATGCGGCCGCTCAGGAACCGGATGCAGGTGGTCTTTCAGGATCCTTACGGAT
CACTCAGCCCGCGCATGTCGGTTGCCGATATCATTGGCGAGGGGCTGAAGATCCATGAGAGGGCGCTCTCCGACAACGAG
CGCGACTCGAGGGTCGCCGCGGCGCTGCAGGAGGTCGGCCTCGAGCCGGCCACCCGCTGGCGCTACCCGCATGAATTCTC
CGGCGGCCAGCGGCAGCGCATCGCGATCGCCCGCGCCATGGTGCTGAAACCGCAATTTGTCATGCTCGACGAGCCGACCT
CGGCGCTCGACATGAGCGTTCAGGCGCAGGTGGTCGACCTCCTGCGCGACCTGCAGCGCAAGCACAACCTCGCCTATCTG
TTCATCAGCCACGACCTCAAAGTGGTGCGGGCGCTTGCCAACGAGGTGATCGTCATGCGGCTCGGCAAGGTGGTCGAACA
GGGGCCGGCCGAGAAGATTTTCAGCGCGCCCGCCGAAGACTACACAAAGGCACTGATGGCCGCCGCCTTCAATCTCGAGG
CCGTCAACCTTTCCGCCATCCGTCAGTAG

Protein sequence :
MTDTLLSVRDLSVAFHQGGDTSIAVDHISFDIKRGETVALVGESGSGKSVTANSILKLLPYPAASHPSGEILFNGKELLK
ASDAELRHVRGNDITMIFQEPMTSLNPLHTIEQQIGEILELHQGIEGAAARAKTLELLDQVGIREAEKRLGAYPHQLSGG
QRQRVMIAMALANRPELLIADEPTTALDVTVQAQILELLKALKDQHGMSMLFITHDLGIVRKIADRVCVMTKGKIVETGP
TAEIFANPQHAYTRHLLASEPKGEPPASDASKPIVIEGKDVKVWFPIKAGFLRRVVDHVKAVDGIDLTLRAGQTLGVVGE
SGSGKTTLGLALTRLISSKGRIAFIGQNIDAYSFGEMRPLRNRMQVVFQDPYGSLSPRMSVADIIGEGLKIHERALSDNE
RDSRVAAALQEVGLEPATRWRYPHEFSGGQRQRIAIARAMVLKPQFVMLDEPTSALDMSVQAQVVDLLRDLQRKHNLAYL
FISHDLKVVRALANEVIVMRLGKVVEQGPAEKIFSAPAEDYTKALMAAAFNLEAVNLSAIRQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 6e-88 42
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 6e-88 42
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 6e-88 42
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 6e-88 42
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 2e-103 42