|
Name : USDA257_c59420 (USDA257_c59420) Accession : YP_006401203.1 Strain : Sinorhizobium fredii USDA 257 Genome accession: NC_018000 Putative virulence/resistance : Unknown Product : transposase Function : - COG functional category : - COG ID : - EC number : - Position : 6194256 - 6195788 bp Length : 1533 bp Strand : - Note : - DNA sequence : ATGACGATGACGGCGGACGAGCTTCCCGACGACCTGGAGACGCTGAAGGCGATGGTGCTTTCGCGCGAGGCGGAGAATGC GCGGCTGCGCCAGATCATCAAGGAGTTGCAGCGCCACCGCTTCGGCCGCCGGGCCGAGACCTTGCCCGAGGACCAGCTTC TGCTTGGCCTCGAAGAAGCGGAGCAGATCGAGGCGGACGCGGACGAGGAAAAGGCGCAGGCTGCCATCGCGGAGCGTCAG GTGCGGGCGGCAAAACGCCGGAGCAATCGCGGCTCGCTTCCCGCCCATCTGCCGCGAGTCGAAACGGTCGTCGACATCGA TGACCATGCCTGCCCCTGCTGCCAACATCCGCTTCACCGGATCGGCGAGGATGTCAGCGAGAAGCTCGACATCGTTCCGG CCCAGTTCCGGGTCCTGGTCGTGCGCCGCCCGAAGTATGCCTGCCGTGCCTGCGAAGACGTCGTCGTTCAGGCTCCGGCT CGCGCGCGGCTGATCGAAGGCGGCATTCCGACGGAGGCGACCGTCGCCCAGGTGCTGGTCTCTAAATACGCCGATCACTT GCCGCTCTATCGGCAGGCGCAAATCTACAAGCGCCAAGGGATCGACCTCGATCGCTCGACGCTCGCCGATTGGGTCGGCC GTGCCGCCTGGCACCTGCGTCCGGTCCACCAGCGGCTGCTTGATCACCTGAAGGCAACCTCCAAGCTCTTTGCCGACGAG ACCACCGCTCCGGTTCTTGATCCGGGGCGTGGCAAGACCAAGACAGGCCAGCTATGGGCCTATGCCCGCGACGATCGACC ATGGCAGGGCGACGATCCGCCCGGCGTCGCCTACGTCTATGCGCCGGACCGCAAGGCCGAGCGGCCGATGTCCCATCTCG ACGGATTTGCCGGCATCCTGCAAGTCGACGGCTACAGCGGCTACCGGCCGCTCGCCGAGAAGAATGGTGTATCCTTGGCC TTCTGCTGGAGCCATGTCCGTCGGCGCTTTTACGAGCTGGCGGCTGCCGGTCCCGCGCCGATCGCCGGCGAGGCGCTCAA ACGCATCGCCGAGCTCTATCGCATCGAGGACGAGATACGCGGACGGACGCAGGATGAGCGTCGTGCCGTACGCCAGCAAA AGAGCCGCCCGATCGCTGACGGTCTCGCGCCCTGGCTGCGCGAACAACTCGCTCTGATCAGCCAGAAGACGAAGCTCGCC GAGGCAATCCGCTATGCGCTCTCACGCTGGGAAGGGCTCACCCGTTTCATCGACGACGGTCGCATCGAGATCGATTCCAA CACCGTCGAACGCTCGATCCGACCGATCGCGCTCAACCGGAAAAACGCACTCTTCGCCGGCTCCGACGCCGGAGCCGAGC AATGGGCGACCATTGCTTCGCTGATCGAAACCGCCAAGCTCAATGACGTCGAGCCGCTTGCCTATCTGGCCGACGTCCTC AGCAGGATCGTCAACGGCCATCCGAACAGCCAACTCGATGACCTGCTGCCTTGGGCTTACGCCGCAAGCACGAAGCCCAA CGCCGTGGCATGA Protein sequence : MTMTADELPDDLETLKAMVLSREAENARLRQIIKELQRHRFGRRAETLPEDQLLLGLEEAEQIEADADEEKAQAAIAERQ VRAAKRRSNRGSLPAHLPRVETVVDIDDHACPCCQHPLHRIGEDVSEKLDIVPAQFRVLVVRRPKYACRACEDVVVQAPA RARLIEGGIPTEATVAQVLVSKYADHLPLYRQAQIYKRQGIDLDRSTLADWVGRAAWHLRPVHQRLLDHLKATSKLFADE TTAPVLDPGRGKTKTGQLWAYARDDRPWQGDDPPGVAYVYAPDRKAERPMSHLDGFAGILQVDGYSGYRPLAEKNGVSLA FCWSHVRRRFYELAAAGPAPIAGEALKRIAELYRIEDEIRGRTQDERRAVRQQKSRPIADGLAPWLREQLALISQKTKLA EAIRYALSRWEGLTRFIDDGRIEIDSNTVERSIRPIALNRKNALFAGSDAGAEQWATIASLIETAKLNDVEPLAYLADVL SRIVNGHPNSQLDDLLPWAYAASTKPNAVA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| c3563 | NP_755438.1 | hypothetical protein | Not tested | PAI I CFT073 | Protein | 3e-75 | 47 |
| st57 | CAC81895.1 | ST57 protein | Not tested | LEE II | Protein | 4e-83 | 44 |
| BCAM0248 | YP_002232880.1 | putative transposase | Not tested | BcenGI11 | Protein | 1e-89 | 43 |
| Z4340 | NP_289564.1 | hypothetical protein | Not tested | OI-122 | Protein | 4e-80 | 42 |
| s0025 | CAD33772.1 | IS66-like transposase | Not tested | PAI I 536 | Protein | 2e-67 | 42 |
| Z1161 | NP_286696.1 | hypothetical protein | Not tested | TAI | Protein | 3e-81 | 42 |
| Z1600 | NP_287104.1 | hypothetical protein | Not tested | TAI | Protein | 3e-81 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| USDA257_c59420 | YP_006401203.1 | transposase | VFG1700 | Protein | 1e-75 | 47 |
| USDA257_c59420 | YP_006401203.1 | transposase | VFG1513 | Protein | 1e-67 | 42 |
