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Name : gabD8 (USDA257_c58730) Accession : YP_006401141.1 Strain : Sinorhizobium fredii USDA 257 Genome accession: NC_018000 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase [NADP+] GabD Function : - COG functional category : - COG ID : - EC number : 1.2.1.79 Position : 6116448 - 6117902 bp Length : 1455 bp Strand : + Note : - DNA sequence : ATGAACATGAAGGACCCGTCGCTGTTTCGCCAGGCCGCGCTCGTCGGCGACAACTGGATCGAAGCGGACCCGCAGAATGC GATCGAGGTGAACAACCCGGCGACCGGCGAGATCATCGGTCTTGTGCCGAAGCTCGGTGCCGCCGAGACCAGGGCCGCGA TCGAGATCGCCGCGCGGGTGCAGAAGGAATGGGCGGCGCGAACCGCTAAGGAGCGCGCGGCAATCCTGCGCCGCTGGTTC GAGCTGATGATCGAGAACAAGGACGATCTAGGCCGGATATTGACTATCGAGCAGGGCAAGCCGCTTGCCGAAGCGACCGG CGAGATCGTCTATGGCGCGAGCTTCATCGAATGGTTCGCCGAAGAGGGGCGGCGCGTCTATGGCGACCTCGTGCCCGGCC ACCAGAAGGACAAGCGCATCCTGGTGATGAAGCAGCCGATCGGCGTGGTCGCTGCCATCACACCCTGGAACTTCCCGAAT GCGATGATCACCCGCAAGGCCGGCCCCGCCTTTGCCGCCGGCTGCGCCATGGTGCTGAAACCGGCCGCGCAGACGCCGTT CTCGGCGATCGCCATCGCCGTGCTCGCCGAGCGGGCCGGCATGCCGAAGGGCCTGTTCAGCGTCATAACCGGCTCGGCCC GCGAGATCGGCGCCGAGATGACCTCCAACCCGACCGTGCGCAAGCTGACCTTCACCGGCTCGACCGAGGTCGGCGCCGAG CTCTACCGCCAGAGCGCCGCGACGATCAAGAAGCTCGGCCTCGAACTCGGCGGCAACGCGCCTTTCATCGTCTTCGACGA CGCGGATCTCGATGCTGCGGTCGAGGGCGCCCTGATCGCCAAGTTCCGCAACAACGGTCAGACCTGCGTCTGCGCCAACC GCCTCTATGTCCAAGACGGCGTCTACGAAGCCTTCTCGGCGAAGCTGGCTCAAGCGGTCGCCAAGCTCAAGACCGGCAAC GGGATGGAAGAGGGCGTCATTCTCGGGCCGCTGATCGACAAGCCGGCGCTTGAGAAGGTCGAGGAGCATGTCGCCGACGC GCTCGCCAAGGGCGCCCGCGTCATCCAGGGCGGCCAGCGCCACGCGCTCGGCGGCAGCTTCTATGAGGCGACGGTGCTGG CGGACGTCACCCAGGCGATGGCGGTGGCGCGCGAGGAAACCTTCGGTCCGGTGGCGCCGCTCTTCCGCTTCAAGGACGAG GCGGACGTCATCCGCCAGGCGAACGACACCGAATTCGGCCTGGCCTCCTATTTCTATGCCAAGGATCTGGCGCGCGTCTT CCGCGTCGCGGAGGCGCTGGAGTACGGCATGGTCGGCGTCAATACCGGTCTGATCTCGACGGCGGAAGCGCCCTTCGGTG GCGTCAAGCTCTCCGGCCTCGGCCGCGAGGGCTCGAAATACGGCATCGAGGAGTTCATGGAAATCAAATATGTCTGCCTC GGCGGTATCGCCTGA Protein sequence : MNMKDPSLFRQAALVGDNWIEADPQNAIEVNNPATGEIIGLVPKLGAAETRAAIEIAARVQKEWAARTAKERAAILRRWF ELMIENKDDLGRILTIEQGKPLAEATGEIVYGASFIEWFAEEGRRVYGDLVPGHQKDKRILVMKQPIGVVAAITPWNFPN AMITRKAGPAFAAGCAMVLKPAAQTPFSAIAIAVLAERAGMPKGLFSVITGSAREIGAEMTSNPTVRKLTFTGSTEVGAE LYRQSAATIKKLGLELGGNAPFIVFDDADLDAAVEGALIAKFRNNGQTCVCANRLYVQDGVYEAFSAKLAQAVAKLKTGN GMEEGVILGPLIDKPALEKVEEHVADALAKGARVIQGGQRHALGGSFYEATVLADVTQAMAVAREETFGPVAPLFRFKDE ADVIRQANDTEFGLASYFYAKDLARVFRVAEALEYGMVGVNTGLISTAEAPFGGVKLSGLGREGSKYGIEEFMEIKYVCL GGIA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 3e-150 | 62 |
