Gene Information

Name : USDA257_c56680 (USDA257_c56680)
Accession : YP_006400938.1
Strain : Sinorhizobium fredii USDA 257
Genome accession: NC_018000
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5891871 - 5892137 bp
Length : 267 bp
Strand : -
Note : -

DNA sequence :
ATGAAACGCAACCGTTTTACGGACGAACAGATCATCGGCATTCTGAAGGAGCATGAAGCGGGCACGCCGGTCTCGGAGCT
CTGCCGCAAGCACGGTGTCAGCGATGCCAGCATCTACAAGTGGAAGGCCAAGTTCGGCGGGATGGACGTGTCTGAGGCCA
AGCGGCTGAAGACGCTTGAGGACGAGAACACGAAACTGAAGCGGCTTCTGGCAGACGCCATGCTCGACAATGCCGCTTTA
AAAGACCTTTTGGGAAAGAAGTGGTGA

Protein sequence :
MKRNRFTDEQIIGILKEHEAGTPVSELCRKHGVSDASIYKWKAKFGGMDVSEAKRLKTLEDENTKLKRLLADAMLDNAAL
KDLLGKKW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13351.1 insertion sequence IS407 OrfA Not tested PAGI-5 Protein 1e-18 65
unnamed ABR13539.1 insertion sequence IS407 OrfA Not tested PAGI-8 Protein 1e-18 65
EXA9 ABD94680.1 IS407 transposase OrfA Not tested ExoU island A Protein 3e-18 63
unnamed AAK01522.1 transposase A Not tested PAGI-1 Protein 2e-18 63
XCV0438 YP_362169.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 5e-14 52
tnp AAL78293.1 putative truncated transposase Not tested Hrp PAI Protein 4e-14 52
trp1400A CAB46581.1 IS1400 transposase A Not tested HPI Protein 5e-16 52