Gene Information

Name : yfeA (USDA257_c55520)
Accession : YP_006400824.1
Strain : Sinorhizobium fredii USDA 257
Genome accession: NC_018000
Putative virulence/resistance : Virulence
Product : periplasmic chelated iron-binding protein YfeA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5766157 - 5767062 bp
Length : 906 bp
Strand : +
Note : -

DNA sequence : 
ATGATCGATCGGATGCGGCGCATGATTCTTACGGCAGCAACGGCAATGGCTGCCTTTTCCCTCCTGACCGGCACGGCGTC
GGCGGCGGAAAAGTTCAAGGCGGTTACCACCTTTACGGTCATTGCCGACATGGCGCGGAATGTTGCGGGCGACGCGGCGA
TCGTCGAATCCATCACCAAGCCCGGCGCCGAGATCCACAACTACCAGCCGACCCCGCGCGACATTCTCAAGGCGCACGAT
GCCCAGCTTGTCCTCTGGAACGGCCTCAACTTGGAGCTCTGGTTCGAAAAATTCTTCCAAAACTTCGACGACATTCCGGG
CGTGGTGGTCTCCGAAGGAGTCGAGCCGATGGGCATCGCCGAAGGCCCTTATACGGGCAAGCCGAACCCGCATGCCTGGA
TGTCGCCGTCGGCGGCAATGATCTATGTCGACAATATCCGCGATGCCTTCGTGAAGTTCGACCCGGACAATGCCGAGGCC
TACAAGGCGAATGCCGAGGCCTACAAGAAGAAGATCGAGGCGACCATCGCGCCGATCAGGGCCGAGCTCGAGAAGATCCC
GGCGGAAAAGCGCTGGCTGGTCTCCAGCGAGGGCGCCTTCAGCTATCTCACGCGCGATTTCGGCCTGAAGGAGCTCTATC
TCTGGCCGATCAACGCCGACCAGCAGGGCACGCCGCAGCAGGTGCGCAAGGTGATCGACGCGGTCAGGGCCAACCACATT
CCGGTCGTCTTCTCCGAAAGCACCATCTCGCCCGATCCAGCCAAGCAGGTGGCGCGCGAGACGGGTGCCAAATACGGCGG
TGTGCTCTATGTCGATTCCTTGAGCGAGGTCGACGGACCGGTGCCTACCTATATCGATCTCCTGCGTGTCACGTCCGAAA
CGATCGCGAAAGGTCTTTCGCAATGA

Protein sequence : 
MIDRMRRMILTAATAMAAFSLLTGTASAAEKFKAVTTFTVIADMARNVAGDAAIVESITKPGAEIHNYQPTPRDILKAHD
AQLVLWNGLNLELWFEKFFQNFDDIPGVVVSEGVEPMGIAEGPYTGKPNPHAWMSPSAAMIYVDNIRDAFVKFDPDNAEA
YKANAEAYKKKIEATIAPIRAELEKIPAEKRWLVSSEGAFSYLTRDFGLKELYLWPINADQQGTPQQVRKVIDAVRANHI
PVVFSESTISPDPAKQVARETGAKYGGVLYVDSLSEVDGPVPTYIDLLRVTSETIAKGLSQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 7e-94 69
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 2e-93 68
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 2e-93 68
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 2e-93 68
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 1e-93 68

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeA YP_006400824.1 periplasmic chelated iron-binding protein YfeA BAC0349 Protein 8e-94 68
yfeA YP_006400824.1 periplasmic chelated iron-binding protein YfeA BAC0439 Protein 2e-90 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeA YP_006400824.1 periplasmic chelated iron-binding protein YfeA VFG0525 Protein 8e-94 68