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Name : lpdV (USDA257_c54080) Accession : YP_006400688.1 Strain : Sinorhizobium fredii USDA 257 Genome accession: NC_018000 Putative virulence/resistance : Unknown Product : dihydrolipoyl dehydrogenase LpdV Function : - COG functional category : - COG ID : - EC number : 1.8.1.4 Position : 5617926 - 5619320 bp Length : 1395 bp Strand : + Note : - DNA sequence : ATGAAGGAAATCTCCTGCAAGCTCCTGGTGCTCGGCGCCGGCCCCGGCGGCTATGTCGCAGCAATCCGGGCCGGACAGCT CGGCATCAACACCGTGGTCGTCGAGAAGGCGAAGGCAGGCGGCACCTGCCTCAATGTCGGCTGCATCCCCTCCAAGGCGC TGATCCATGCGGCAGAGGAGTTTCACAAGCTTCGCGCTGCCGCCTCCGGCAAGAGCCCGCTCGGCCTTTCGCTCGAGGCG CCGGCGATCGACCTCAAGCGAACGATCGCCTGGAAGGACGGCATCGTCGGGCGCCTGAGCAGCGGCGTGACGGGCCTCCT CAAGAAGGCCGGCGTTAAGGCCGTCATCGGCCAAGCGCGCTTCGTCGACGGCAAGACGGTGGACGTCGAAACGGAAATCG GCGTCCAGCGCATTCGCGCCGAAGCGATCGTCATCGCCACCGGCTCTGTCCCGGTCGAGCTTCCCGACCTGCCGTTCGGC GGCAATGTCATCTCCTCGACCGACGCTTTGGCGTTGAAGGAGGTTCCGCAGACGCTTGCCGTCATCGGCGGCGGCTATAT CGGCCTCGAACTCGGCACCGCCTTCGCCAAGCTCGGCTCGAAGGTCACCGTGCTCGAAGCCATGGACCGCGTCCTGCCGC AATATGACGCCGATCTCTCGAAGCCGGTCATGAAGCGCCTCGGCGAACTCGGGATCGAGGTCTTCACCCGCACCGCAGCC AAGCGCCTGTCGGCGGACCGACGCGGCTTGCTTGCCGAAGAAAACGGCCGCGCCTTCGAGGTGCCGGCCGAAAAGGTTTT GGTCACCGTCGGCCGCAGGCCTGTGATGGAGGGCTGGGGACTGGAGGAGATCGATCTCGATCGCTCGGGCAAGTTCATCC GCATCGACGACCAATGCCGCACGTCGATGCGCGGCATCTATGCGATCGGCGACGTCACCGGCGAACCGATGCTCGCCCAC CGCGCCATGGCGCAGGGCGAAATGGTTGCCGAAATCATCGCCGGTCAGAAGCGCAGCTGGGACAAGCGCTGCATTCCCGC CATCTGCTTCACCGATCCGGAGATCGTCAGCGCCGGTCTCTCGCCGGAGGAGGCACGTGCGGCCGGCATCGAGGTCAAGA TCGGCCAGTTCCCCTTCCAGGCGAACGGTCGCGCCATGACGACGCTTGCCGAGGACGGTTTCGTGCGCGTCGTTGCGCGC GCCGACAACCACCTCGTCCTCGGCATCCACGCAGTTGGGCATGCTGTCTCGGAGCTTTCGTCGGCCTTTGCGCTGGCAAT CGAGATGGGCGCGCGTCTGGAGGACATCGCCGGCACGATCCATGCGCACCCGACCCAGTCGGAAGGTTTCCAGGAGGCGG CATTCAAGGCGCTAGGGCACGCGCTGCATATTTGA Protein sequence : MKEISCKLLVLGAGPGGYVAAIRAGQLGINTVVVEKAKAGGTCLNVGCIPSKALIHAAEEFHKLRAAASGKSPLGLSLEA PAIDLKRTIAWKDGIVGRLSSGVTGLLKKAGVKAVIGQARFVDGKTVDVETEIGVQRIRAEAIVIATGSVPVELPDLPFG GNVISSTDALALKEVPQTLAVIGGGYIGLELGTAFAKLGSKVTVLEAMDRVLPQYDADLSKPVMKRLGELGIEVFTRTAA KRLSADRRGLLAEENGRAFEVPAEKVLVTVGRRPVMEGWGLEEIDLDRSGKFIRIDDQCRTSMRGIYAIGDVTGEPMLAH RAMAQGEMVAEIIAGQKRSWDKRCIPAICFTDPEIVSAGLSPEEARAAGIEVKIGQFPFQANGRAMTTLAEDGFVRVVAR ADNHLVLGIHAVGHAVSELSSAFALAIEMGARLEDIAGTIHAHPTQSEGFQEAAFKALGHALHI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0077 | NP_763632.1 | dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 | Not tested | SCCpbp4 | Protein | 6e-84 | 44 |
