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Name : lysS (USDA257_c53760) Accession : YP_006400656.1 Strain : Sinorhizobium fredii USDA 257 Genome accession: NC_018000 Putative virulence/resistance : Virulence Product : lysine--tRNA ligase LysS Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 5584485 - 5585981 bp Length : 1497 bp Strand : + Note : - DNA sequence : ATGAACGAAAAGACAGTAACCGCCGGCCTTTCCTCCGACGCAACCGAAGTGCGCGCCCAGAAGCTTGACCTGCTGCGCGA GCAGATCGGCGAAGTCTACCCGGCGCATTTCCACCGCACGCTGACCAATGCGGAACTCGCCGAAAAATATGCCGGGCTGG AGCCCGATACGGAGAGCGGCGACACGGTGACGGTCGCAGGCCGGGTTTTCTCCTCGCGCAATTCCGGCATGTTCATGGAT ATCCATGACGCCTCCGGCAAGATCCAGATCTTTTCGCACAAGGACACGGCTCCGGAAGAGGCGCGTGTGCTTCTGCCGAT GATCGACCTTGGCGACATCATCGGCGTCACCGGCGAGGTGCGCCGTACGAAGCGTGGCGAGCTGACGGTGAATGCCAAGG AAATCACCATGCTCTGCAAGTCGCTCCTGCCGATGCCGGAGAAGTATCACGGGCTTGCCGACATCGAGACGCGCTACCGC AAGCGCTATCTCGACATCATGGTCAACGAGGACTCAAAGCTCCGCTTCCAGCAGCGCAGCCGCATCGTTTCGAGTCTGCG CCGCGTCCTCGAGGACGAGGGCTTCATGGAAGTCGAAACGCCGATGCTACAGCCGATCTATGGCGGCGCGACGGCCGAGC CGTTCAAGACGCATCACAACACGCTGAAGCTCGACATGTATCTGCGCATTGCGCCCGAGCTTTATCTGAAGCGCGTGCTG GTTTCCGGCCTCACCGATAAGGTCTTCGAGATCAACCGCAACTTCCGCAACGAAGGCGTCTCCACCCGGCACAATCCGGA ATTCACGATGATGGAGTGCTACTGGGCCTATGCGGACTACGAGGACATGATGGGCCTCGTCGAACGCATGTTCGAGACCC TGGCGCTGGCGGTCCACGGCAAGACCGAGTTCGAATTCGGCGACAAGCAGCTCTCCTTTAAGGGACCGTTCCCACGCGTG TCGATGCCGGCCGCCGTCAAGGATGCAATCGGCGTCGACTTCCTCGCAATCAACACCGACGAGGAGGCCCGCGAGGCGGC AAGGAACGCTGGCCTCGAGGTCGAGAAGGACGCCACCTGGGGCGAGGTCCTCGCTTTCATCTTCGAGGAGAAGGTCGAAG CGACGCTGATCCAGCCGGCCCATGTCATCCATTTCCCGAAGGACATTTCCCCCTTCGCCAAGGAGGTGCCGGGCGAGCCG CGGCTCGTAGAGCGCTTCGAGACCTATTGCAACGGCTGGGAGATCGGCAACGCCTTCTCCGAGCTCAACGACCCGGTCGA GCAGCGCGCCCGCATGGTCGAGCAGATGGAACAGGCCCATGCCCGCGGCGAAAAGGAAAAGACCCTCGACGAGGACTTCC TCGACGCCATGGACCAGGGCATGCCGCCGGCCGGCGGCCTCGGCATCGGCGTCGACCGGCTGATCATGCTGCTCACCAAT TCGCCGTCGATCCGCGACATCATTCTCTTCCCGGCCCGTCGTCACAAGGGCGACTGA Protein sequence : MNEKTVTAGLSSDATEVRAQKLDLLREQIGEVYPAHFHRTLTNAELAEKYAGLEPDTESGDTVTVAGRVFSSRNSGMFMD IHDASGKIQIFSHKDTAPEEARVLLPMIDLGDIIGVTGEVRRTKRGELTVNAKEITMLCKSLLPMPEKYHGLADIETRYR KRYLDIMVNEDSKLRFQQRSRIVSSLRRVLEDEGFMEVETPMLQPIYGGATAEPFKTHHNTLKLDMYLRIAPELYLKRVL VSGLTDKVFEINRNFRNEGVSTRHNPEFTMMECYWAYADYEDMMGLVERMFETLALAVHGKTEFEFGDKQLSFKGPFPRV SMPAAVKDAIGVDFLAINTDEEAREAARNAGLEVEKDATWGEVLAFIFEEKVEATLIQPAHVIHFPKDISPFAKEVPGEP RLVERFETYCNGWEIGNAFSELNDPVEQRARMVEQMEQAHARGEKEKTLDEDFLDAMDQGMPPAGGLGIGVDRLIMLLTN SPSIRDIILFPARRHKGD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 2e-97 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_006400656.1 | lysine--tRNA ligase LysS | VFG1668 | Protein | 1e-97 | 48 |
