Gene Information

Name : xylA (USDA257_c53650)
Accession : YP_006400646.1
Strain : Sinorhizobium fredii USDA 257
Genome accession: NC_018000
Putative virulence/resistance : Unknown
Product : xylose isomerase XylA
Function : -
COG functional category : -
COG ID : -
EC number : 5.3.1.5
Position : 5571030 - 5572340 bp
Length : 1311 bp
Strand : -
Note : -

DNA sequence :
GTGAGCACCGGATTTTTCGGCGACATCGCCAAGATCAGATATGAAGGCCCGGAGAGCACCAATCCGCTCGCCTTCCGCCA
TTACAATCCGGACGAGATCGTCCTCGGCAAGCGGATGGAAGATCATCTGCGCTTCGCAGTTGCCTATTGGCACACCTTCG
TCTGGCCGGGCGGCGACCCCTTCGGCGGACAGACCTTCGAGCGTCCCTGGTTCAAGGACTCGATGGAAGCGGCCAAGCTG
AAGGCCGACGTCGCCTTCGAGTTCTTCCAGCTTCTCGGTACGCCGTTCTATTGCTTCCATGACGCCGACGTTCGTCCAGA
GGGCCGGACCTTCGCCGAGAACACCAGCAATCTCAACGAGATCGTCGATTACTTCGCCAAGAAGCAGGCCGAGACCGGCG
TCAAGCTGCTGTGGGGCACGGCGAATCTCTTCTCGAACCGGCGCTACATGTCGGGTGCGGCGACCAACCCGGACCCGGAC
GTCTTCGCCTTTGCCGCGGCAACTGTAAAGACCTGCATCGATGCGACACAGCGGCTTCGTGGCCAGAACTACGTGCTTTG
GGGCGGGCGGGAAGGCTATGAGACGCTGCTCAACACCGATCTGAAGCGCGAACTCGACCAACTCGGCCGTTTCGTCAATC
TCGTTGTCGAATACAAGCACAAGATCGGCTTCAAGGGCACGATCCTCATCGAGCCGAAGCCGCAGGAGCCGACCAAGCAC
CAGTACGACTTCGACGTTGCGACCGTCTATGGCTTCCTGAAGACGTACGGCCTCGAGAACGAGGTGAAGGTCAATATCGA
GCAGGGCCACGCGATCCTTGCCGGCCACTCCTTCGAGCACGAGCTGGCGCTTGCCAATGCGCTCGGCATCTTCGGCTCGA
TCGACATGAACCGCAACGACTACCAGTCCGGCTGGGATACCGACCAGTTCCCGAACAATGTTCCCGAGATGGCGCTCGCC
TATTATCACGTGCTCGCAGGCGGTGGCTTCAAGACCGGTGGCACCAACTTCGACGCAAAGCTGCGTCGCCAGTCGATCGA
TCCGGAAGATCTGCTTATCGGCCATGTCGGCGGCATGGATTGCTGCGCACGCGGCCTCAAGGCGGCGGCGAAGATGATCG
AGGACAAGGGGCTCTCTGCGCCGCTGGAGAAACGCTATGCCGGCTGGAATGTGCCCGAGGCGAAGAAGATGCTCGAGGGC
GGCTTCTCGCTTGACGAGATCGAGGCCTGGGTGCGCAAGGCCGACCTCAATCCGCAGCCGAAATCCGGCAAGCAGGAACT
GCTGGAGAACATCGTAAACCGCTACGTCTGA

Protein sequence :
MSTGFFGDIAKIRYEGPESTNPLAFRHYNPDEIVLGKRMEDHLRFAVAYWHTFVWPGGDPFGGQTFERPWFKDSMEAAKL
KADVAFEFFQLLGTPFYCFHDADVRPEGRTFAENTSNLNEIVDYFAKKQAETGVKLLWGTANLFSNRRYMSGAATNPDPD
VFAFAAATVKTCIDATQRLRGQNYVLWGGREGYETLLNTDLKRELDQLGRFVNLVVEYKHKIGFKGTILIEPKPQEPTKH
QYDFDVATVYGFLKTYGLENEVKVNIEQGHAILAGHSFEHELALANALGIFGSIDMNRNDYQSGWDTDQFPNNVPEMALA
YYHVLAGGGFKTGGTNFDAKLRRQSIDPEDLLIGHVGGMDCCARGLKAAAKMIEDKGLSAPLEKRYAGWNVPEAKKMLEG
GFSLDEIEAWVRKADLNPQPKSGKQELLENIVNRYV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
xylA NP_814326.1 xylose isomerase Not tested Not named Protein 8e-100 50
ef0082 AAM75286.1 EF0082 Not tested Not named Protein 6e-100 50