Gene Information

Name : fixJ (USDA257_c38930)
Accession : YP_006399195.1
Strain : Sinorhizobium fredii USDA 257
Genome accession: NC_018000
Putative virulence/resistance : Virulence
Product : transcriptional regulatory protein FixJ
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4052531 - 4053163 bp
Length : 633 bp
Strand : +
Note : -

DNA sequence : 
ATGAACGGATTGATGCAAATGACTGACTATATTGTGCATATTGTTGATGACGAAGAGGCCGTGAGGAAATCGCTTGCCTT
CATGCTGACGATGAACGGCTTCGCTGTGAAAATGCATCAATCGGCCGAGGCCTTTCTCGCCTTCGCGCCGAACGTCAGAA
ACGGGATTCTCGTGACGGATCTGAGAATGCCAGATATGTCCGGCGTCGAACTCCTGCGCAGTCTCGGCACTCAGAAAATC
AAGATACCTTCGATTGTCATCACGGGACACGGCGACGTGCCTATGGCGGTAGAGGCCATGAAGGCGGGGGCGATCGATTT
CATCGAGAAGCCTTTCGAAGACTCCGTGATCGTCGAGGCGATCGAGAGGGCATCCGAACATCTGGTCGTCCCGGAAGCCG
ACGCGGAGGAAATCGTCGACATTCAGGCACGCCTCCAGACGCTCAGTGAGAGGGAACGCCAGGTGCTCTCGGCGGTGGTG
GCTGGCCTTCCCAACAAATCGATCGCCTACGATCTTGATATCAGCCCCCGCACCGTCGAGGTGCACCGCGCAAACGTAAT
GGCCAAGATGAAGGCGAAGAGCCTTCCCCATCTCGTTCGAATGGCGCTCGCCGCCGGCTTCGGGCCTTCCTGA

Protein sequence : 
MNGLMQMTDYIVHIVDDEEAVRKSLAFMLTMNGFAVKMHQSAEAFLAFAPNVRNGILVTDLRMPDMSGVELLRSLGTQKI
KIPSIVITGHGDVPMAVEAMKAGAIDFIEKPFEDSVIVEAIERASEHLVVPEADAEEIVDIQARLQTLSERERQVLSAVV
AGLPNKSIAYDLDISPRTVEVHRANVMAKMKAKSLPHLVRMALAAGFGPS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrR NP_456141.1 putative two-component response regulator Not tested SPI-2 Protein 3e-25 41
ttrR NP_805058.1 two-component response regulator Virulence SPI-2 Protein 3e-25 41
ttrR CAB37412.1 TtrR Virulence SPI-2 Protein 2e-25 41
ttrR YP_216395.1 tetrathionate reductase complex: response regulator Virulence SPI-2 Protein 3e-25 41
ttrR NP_460352.2 response regulator Virulence SPI-2 Protein 2e-25 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fixJ YP_006399195.1 transcriptional regulatory protein FixJ VFG0488 Protein 8e-26 41