Gene Information

Name : glnA1 (USDA257_c36910)
Accession : YP_006398998.1
Strain : Sinorhizobium fredii USDA 257
Genome accession: NC_018000
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : -
COG ID : -
EC number : 6.3.1.2
Position : 3854406 - 3855815 bp
Length : 1410 bp
Strand : -
Note : -

DNA sequence :
ATGACGACTGCCAGTGAAATTCTGAAGCAGATCAAGGACAACGACATCAAGTTCGTCGATCTGCGCTTTACCGACCCGAA
GGGCAAATTGCAGCACGTGACTATGGACATTGCTGTGGTCGACGAGGACATGTTCGCCGACGGCGTCATGTTCGACGGTT
CTTCGATTGCCGGCTGGAAGGCGATCAACGAGTCCGACATGGTGCTGATGCCCGATCCGGAAACGGCCCATATGGATCCG
TTCTTCGCGCAATCCACCATGGTCATCGTCTGCGATATTCTCGATCCGGTTTCCGGCGAGGCCTACAACCGCGATCCGCG
CGGCACGGCGAAGAAGGCCGAGGCCTACCTCAAGGCATCCGGCATTGGCGACACCGTCTTCGTCGGCCCCGAGGCTGAAT
TCTTCGTCTTCGACGACGTCAAATACAAAGCCGACCCGTACAACACCGGCTTCAAGCTCGACAGCGCCGAACTGCCCTCC
AACGACGATACGGACTACGAGACCGGCAACCTCGGTCATCGTCCGCGCATCAAGGGCGGCTACTTCCCGGTTCCGCCGGT
CGACAGCTGCCAGGACATGCGTTCCGAAATGCTGACGGTGCTTGCCGAAATGGGCGTCACGGTCGAGAAGCATCACCACG
AAGTGGCCGCCGCCCAGCACGAGCTTGGCGTCAAGTTCGACGCGCTCGTTCGCAACGCCGACAAGATGCAGATCTACAAG
TATGTCGTGCATCAGGTTGCCAATGCCTACGGCAAAACCGCGACCTTCATGCCGAAGCCGGTTTTCGGCGACAACGGCTC
GGGCATGCATGTGCACCTGTCGATCTGGAAGGACGGCAAGCCGACTTTCGCCGGTGACGAATACGCCGGCCTCTCAGAAA
CCTGCCTCTTTTTCATCGGCGGCATCATCAAGCACGCCAAGGCGTTGAACGCGTTCACCAACCCGTCGACGAACTCCTAC
AAGCGTCTCGTCCCCGGCTACGAGGCACCGGTTCTGCTTGCCTATTCGGCCCGTAACCGCTCGGCCTCCTGCCGCATTCC
GTTCGGCAGCAACCCCAAGGCGAAGCGCGTCGAAGTCCGCTTCCCGGATCCGGCCGCCAACCCCTATCTCGCCTTCGCCG
CCATGCTGATGGCCGGCCTCGATGGCATCAAGAACAAGCTGCATCCCGGCAAGGCGATGGACAAGGATCTCTACGACCTG
CCGCCGAAAGAACTGAAGAAGATCCCGACGGTTTGCGGCAGCCTGCGCGAGGCCCTCGAAAGCCTCGACAGGGACCGCAA
GTTCCTGACCGCCGGCGGCGTCTTCGACGACGACCAGATCGACTCGTTCATCGAGCTCAAGATGCAGGAAGTCATGCGCT
TCGAGATGACCCCGCATCCGGTCGAGTACGACATGTATTATTCCGTCTGA

Protein sequence :
MTTASEILKQIKDNDIKFVDLRFTDPKGKLQHVTMDIAVVDEDMFADGVMFDGSSIAGWKAINESDMVLMPDPETAHMDP
FFAQSTMVIVCDILDPVSGEAYNRDPRGTAKKAEAYLKASGIGDTVFVGPEAEFFVFDDVKYKADPYNTGFKLDSAELPS
NDDTDYETGNLGHRPRIKGGYFPVPPVDSCQDMRSEMLTVLAEMGVTVEKHHHEVAAAQHELGVKFDALVRNADKMQIYK
YVVHQVANAYGKTATFMPKPVFGDNGSGMHVHLSIWKDGKPTFAGDEYAGLSETCLFFIGGIIKHAKALNAFTNPSTNSY
KRLVPGYEAPVLLAYSARNRSASCRIPFGSNPKAKRVEVRFPDPAANPYLAFAAMLMAGLDGIKNKLHPGKAMDKDLYDL
PPKELKKIPTVCGSLREALESLDRDRKFLTAGGVFDDDQIDSFIELKMQEVMRFEMTPHPVEYDMYYSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 4e-106 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA1 YP_006398998.1 glutamine synthetase VFG1399 Protein 5e-110 50