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Name : gabD6 (USDA257_c31280) Accession : YP_006398453.1 Strain : Sinorhizobium fredii USDA 257 Genome accession: NC_018000 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase [NADP+] GabD Function : - COG functional category : - COG ID : - EC number : 1.2.1.79 Position : 3278628 - 3280124 bp Length : 1497 bp Strand : - Note : - DNA sequence : ATGACCGCTATTTTTGCGCGCACCGCCTTTCACGAAGCGTTGAAACAGCTGAACGACCGACAATTGCTGCGGGAGCTCGC CTATGTCGGCGGCCGCTGGATTGCCGGACGGGACGGCAGGTGTCTCGAAGTCAGCGATCCAGCCAGTGGTGCCGCCCTCG CCTTCGTCGCTTCGCTCGATGAGGGCCAGACGACCGAAGCGATCGATGCGGCGGAGAAGGCATTCAAATCCTGGCGCAAT ATGCTGCCGCAGGCGCGCGCCGCCATCCTGCGCAAGTGGCACGAGCTGATGCTCGCGGCCCGCGAGGACCTGGCCCTGTT GATGACACTTGAACAGGGCAAGCCACTCGCCGAGTCCCGCGGCGAGATCGACTACGCGGCTTCCTTCATCGAGTGGTACG CCGAGGAGGGCAAGCGCCTCAACGCCGAGACCGTGACGAGCCACCTCGCCGGCGCCGAGATGATCGTCCGCCGGGAGGCG CTCGGCGTCGTCGGCATCGTCACGCCGTGGAATTTCCCCTCCGCCATGATCACCCGCAAGGCGGCCGCAGCCCTTGCGGC GGGCTGCACGGTGGTTGCGCATCCCTCCTCCGAGACGCCGCTTTCCGCTTTGGCACTTGCCGAGCTCGGCGAACGCGCCG GCCTTCCCGCCGGCGTCTTCAACGTTGTCACCGGCAACGCCGCAACGATCGTCGGGCGCGTGTGCGAAGACGCGCGAGTC CGCGCCATGAGCTTCACCGGGTCGACGGAGATTGGCCGGTTGATTGCCGCCCAATCAGCGCCGACGATGAAGCGGCTCGT CATGGAACTCGGGGGCCACGCTCCACTGATCGTCTTTGCCGATGCGGATGTAGAGAAAGCGGCCGATATTGCCATCGCCG CGAAGTTCGCCACTTCCGGACAGGACTGCCTTGCCGCCAACCGCATCTATGTCGAGCGCCCGATCCTCAAATCCTTCGAG GAGGCTTTCGCGGCGCGGATCGCTCGCTTGACGGTAGGACCCGGACTTCGACCGGGCACCGACATCGGGCCGCTGATGCA CGAGCGTGCCGTCGCCAAGATCGAGGAACAGGTTCAGGACGCGCTCAAACTGGGCGCCAAGCTTGCCGTCGGCGGCACGC GCCACGCGGCCGGGCCGCTGTTCTTCCGGCCGACGCTTCTGACCGATGTGCCCGACGATGCCCTGATCATGCGCGAAGAG ACTTTCGGCCCCGTCGCGGCCGTCACCGCCTTCGACAGCGAAGACGACGTAGTCGCCCGGGCGAACGACACCGAATATGG CCTCGTCGCCTATGTCGTCACCGAAAACGGCGCCCGCCAGATGCGGCTCGCCCGGGCACTCGAATACGGGATGGTGGCGA TCAACCGGGTGAAGATCACCGGCGGGCCGATCCCCTTCGGCGGATGGAAACAATCCGGGCTCGGCCGCGAAGGCTCGCGC CACGGCATGGAGGCCTTCACCGAGCTCAAATATCTCTGCATCGACACCGCCGCCTGA Protein sequence : MTAIFARTAFHEALKQLNDRQLLRELAYVGGRWIAGRDGRCLEVSDPASGAALAFVASLDEGQTTEAIDAAEKAFKSWRN MLPQARAAILRKWHELMLAAREDLALLMTLEQGKPLAESRGEIDYAASFIEWYAEEGKRLNAETVTSHLAGAEMIVRREA LGVVGIVTPWNFPSAMITRKAAAALAAGCTVVAHPSSETPLSALALAELGERAGLPAGVFNVVTGNAATIVGRVCEDARV RAMSFTGSTEIGRLIAAQSAPTMKRLVMELGGHAPLIVFADADVEKAADIAIAAKFATSGQDCLAANRIYVERPILKSFE EAFAARIARLTVGPGLRPGTDIGPLMHERAVAKIEEQVQDALKLGAKLAVGGTRHAAGPLFFRPTLLTDVPDDALIMREE TFGPVAAVTAFDSEDDVVARANDTEYGLVAYVVTENGARQMRLARALEYGMVAINRVKITGGPIPFGGWKQSGLGREGSR HGMEAFTELKYLCIDTAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 2e-100 | 51 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 2e-69 | 42 |
