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Name : fliI (USDA257_c03040) Accession : YP_006395659.1 Strain : Sinorhizobium fredii USDA 257 Genome accession: NC_018000 Putative virulence/resistance : Virulence Product : flagellum-specific ATP synthase FliI Function : - COG functional category : - COG ID : - EC number : 3.6.3.14 Position : 345205 - 346605 bp Length : 1401 bp Strand : + Note : - DNA sequence : ATGGAACGCCAAGGCTCTGACATCCTTCCGGCTTCGACCTCGCTGGCGGCGCTCGCCGGCCTGGTCGAGCGTTATGCCAA TCCCGACTTTTCGATCGCCCCAGGCGGCCATGTCCAGACGATCTCGCCGGGGCACTATACCGTCACCGGCCTGTCTCGCC ATGTGCGGCTCGGGGATTTCGTGGCGCATAAGAGCGCGACCGGCACCCATCTCGGCGAGGTCGTCCGCGTCGAACCGGAG CGGGTCGTCGTCTGCCCGATCGAGCCCGGCGATCCGATCGGCATCCACGATACCGTCATCCGCAAGGGCGCCTTCCGGAT CGCGCCGACGGACAATTGGTGCGGCCGCACGATCAACGCGCTGGCCGACCCGATAGACGGCCGCGGTCCCCTCATGCAGG GCGACATCCGCCGTCCGATCTCCAACACCGCCCCGCCGTCGATGACCCGCAGACGCGTCGAACAGGGTTTCAAGACGGGC GTGCGCGCCGTCGACATCTTTTCGCCGCTCTGCCTCGGGCAGCGCCTCGGCATTTTTGCCGGCTCCGGCGTCGGCAAGTC GACGCTGCTTTCGATGCTTGCGCGCGCCGACGCCTTCGACAAGGTGGTGATTGCGCTGGTCGGCGAACGCGGCCGCGAAG TGCGTGAATTCATCGAGGATACGCTCGGCGACAATCTCGCCAAGTCGGTTGCCGTCGTCGCCACCAGCGACGAGAGCCCG ATGCTCAGGAAAATGGCGCCGCTGACGGCAGTGACGATCGCCGAGCACTATCGTGACAAGGGCGACAACGTTCTGCTGAT CGTCGACAGCGTGACGCGTTTTGCCCATGCGATCCGCGAGGTGGCGACGGCGGCCGGCGAGCCGCCGATCGCCCGCGGCT ATCCGGCTTCGGTCTTCACGGAATTGCCGCGCCTGCTCGAGCGCGCGGGCCCCGGTGCCGAAGGCACCGGCACGATCACC GCGATCATCTCGATCCTGGTCGACGGCGACAATCACAATGATCCGGTTGCCGATTCGGCGCGCGGCATCCTCGACGGGCA CATCGTCCTCGACCGCAGTCTGGCCGAAGAAGGTCGCTATCCGCCGATCGATCCGCTGGCTTCCATCTCGCGCCTGGCAA GAAAGGCCTGGACGCCGGACCAGGAAAAGCTCGTGGCGCGGCTGAAATCGCTGATCCATCGCTTCGAGGAGACTCGTGAC CTCAGGCTGATCGGCGGCTACCGCGCCGGCGGCGACCCCGATCTCGACATGGCGATCAAACAGGTGCCCGTCATCTATGA CGTCCTCAAGCAGACGCCCGGCGAGCGGTCCGCCACCGATGCCTTCACCGACCTTGCCAATGCGCTGAAGGCAGCCGCCA TGGGCAACCAGCCCGCCGCGGGCATCCGGGGGAAGGGATAG Protein sequence : MERQGSDILPASTSLAALAGLVERYANPDFSIAPGGHVQTISPGHYTVTGLSRHVRLGDFVAHKSATGTHLGEVVRVEPE RVVVCPIEPGDPIGIHDTVIRKGAFRIAPTDNWCGRTINALADPIDGRGPLMQGDIRRPISNTAPPSMTRRRVEQGFKTG VRAVDIFSPLCLGQRLGIFAGSGVGKSTLLSMLARADAFDKVVIALVGERGREVREFIEDTLGDNLAKSVAVVATSDESP MLRKMAPLTAVTIAEHYRDKGDNVLLIVDSVTRFAHAIREVATAAGEPPIARGYPASVFTELPRLLERAGPGAEGTGTIT AIISILVDGDNHNDPVADSARGILDGHIVLDRSLAEEGRYPPIDPLASISRLARKAWTPDQEKLVARLKSLIHRFEETRD LRLIGGYRAGGDPDLDMAIKQVPVIYDVLKQTPGERSATDAFTDLANALKAAAMGNQPAAGIRGKG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcN | AAP34339.1 | HrcN | Virulence | Hrp PAI | Protein | 8e-66 | 50 |
| XC_3006 | YP_244074.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 4e-65 | 49 |
| hrcN | NP_636610.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 4e-65 | 49 |
| hrcN | YP_362163.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 3e-65 | 48 |
| hrpB6 | AAB08461.1 | HrpB6 | Virulence | Hrp PAI | Protein | 2e-65 | 48 |
| YPO0267 | YP_002345348.1 | type III secretion system ATPase | Virulence | Not named | Protein | 5e-61 | 46 |
| escN | AAC38383.1 | EscN | Virulence | LEE | Protein | 3e-59 | 45 |
| ssaN | CAA70537.1 | secretion system apparatus | Virulence | SPI-2 | Protein | 5e-60 | 44 |
| ssaN | YP_216423.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 7e-60 | 44 |
| ssaN | NP_460380.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 6e-60 | 44 |
| ssaN | NP_456113.1 | putative type III secretion ATP synthase | Virulence | SPI-2 | Protein | 8e-59 | 44 |
| ssaN | NP_805086.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 8e-59 | 44 |
| escN | NP_290268.1 | hypothetical protein | Virulence | LEE | Protein | 5e-59 | 44 |
| ECs4568 | NP_312595.1 | EscN | Virulence | LEE | Protein | 5e-59 | 44 |
| escN | YP_003236088.1 | translocator EscN | Virulence | LEE | Protein | 4e-59 | 44 |
| escN | CAI43874.1 | EscN protein | Virulence | LEE | Protein | 2e-58 | 44 |
| escN | YP_003223475.1 | translocator EscN | Virulence | LEE | Protein | 3e-58 | 44 |
| escN | AAC31513.1 | L0034 | Virulence | LEE | Protein | 4e-59 | 44 |
| unnamed | ACU09458.1 | type III secretion apparatus H+-transporting two-sector ATPase | Virulence | LEE | Protein | 4e-59 | 44 |
| escN | AAK26715.1 | EscN | Virulence | LEE | Protein | 9e-58 | 44 |
| escN | AAL57542.1 | EscN | Virulence | LEE | Protein | 9e-58 | 44 |
| escN | CAC81862.1 | EscN protein | Virulence | LEE II | Protein | 4e-58 | 44 |
| escN | YP_003232153.1 | T3SS structure protein EscN | Virulence | LEE | Protein | 6e-58 | 44 |
| unnamed | AAL06369.1 | EscN | Virulence | LEE | Protein | 1e-59 | 44 |
| ysaN | AAS66842.1 | YsaN | Not tested | SSR-1 | Protein | 3e-49 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliI | YP_006395659.1 | flagellum-specific ATP synthase FliI | VFG0048 | Protein | 2e-64 | 48 |
| fliI | YP_006395659.1 | flagellum-specific ATP synthase FliI | VFG2331 | Protein | 2e-64 | 48 |
| fliI | YP_006395659.1 | flagellum-specific ATP synthase FliI | VFG0192 | Protein | 7e-63 | 47 |
| fliI | YP_006395659.1 | flagellum-specific ATP synthase FliI | VFG2144 | Protein | 4e-66 | 47 |
| fliI | YP_006395659.1 | flagellum-specific ATP synthase FliI | VFG0730 | Protein | 1e-59 | 45 |
| fliI | YP_006395659.1 | flagellum-specific ATP synthase FliI | VFG0515 | Protein | 3e-60 | 44 |
| fliI | YP_006395659.1 | flagellum-specific ATP synthase FliI | VFG0812 | Protein | 2e-59 | 44 |
