Gene Information

Name : virB11 (USDA257_c29280)
Accession : YP_006398256.1
Strain : Sinorhizobium fredii USDA 257
Genome accession: NC_018000
Putative virulence/resistance : Virulence
Product : type IV secretion system protein VirB11
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3069988 - 3070980 bp
Length : 993 bp
Strand : +
Note : -

DNA sequence : 
ATGACCGACGACCCTGACGCTGCAGTCGTCCGCGAACTGCTCGCTCCGTTTTCGCCATTCCTGAAGGACAAGTCCCTCTA
TGAAGTGATCGTAAATCGGCCTGGGCAGGTGCTGACAGAGGGCGCCGGTGGTTGGCGGACCCATAATCTGCCAGAGCTTA
CCTTCGAAAAGCTGATGCGCCTTGTTCGGGCCGTGGCCAGTTTTTCCAATCAATCCATTGATGAAACGCGACCAATCTTG
TCGGCGACACTGCCAGGCGATGAGCGGATCCAGATCGTCATTCCTCCTGCGACCAACAGGAACACTCTCAGCATCACCGT
CCGAAAGCCGTCATCGGTGACGTTCACGCTCGATGATTTGGAGCAGAGAAGGTTTTTTTCCGAGACGCGAGGAGACAACG
AAAGTATCTCGACGGGGGAACAGGATCTGGTGGCGCTCTACCGAGCGGGCCGTTTCAAGGATTTTTTGCGCGAGGCCGTT
ATCGCGCGGAAGAACATCATCATCTCAGGCGCAACGGGATCGGCCAAGACGACGCTCTCGAAAGCGTTGATCAAGCATAT
TCCTCAGCATGAGCGGATAATTTCGATCGAGGACACACCTGAACTGGTTATTCCGCAGCCCAACCACGTGCGCCTGTTCT
ATTCGAAAGGCGCCCAGGGACTTTCGGGTGCCGGCCCAAAAGAACTGCTGGAGTCATGCCTGCGCATGCGGCCGGACCGA
ATTCTGCTGCAGGAGCTGCGCGATGGCACAGCATTCTACTACGTGCGCAACGTCAACTCCGGTCACCCCGGATCGATCAC
CACCGTGCATGCCAATTCCGCCAAGCTGGCCTTCCAACAGTTGACGCTTCTTGTGAAGGAATCCGAAGGGGGACGTAATC
TGGAGCCCGAGGACATCGACAGATTGTTGAAACTCTCTATCGACGTCATCGTTCAATGCAAGCGAATGGATGGTCGGTTT
GGCGCAACAGAAATCTACTTTCGCGCTCGATAA

Protein sequence : 
MTDDPDAAVVRELLAPFSPFLKDKSLYEVIVNRPGQVLTEGAGGWRTHNLPELTFEKLMRLVRAVASFSNQSIDETRPIL
SATLPGDERIQIVIPPATNRNTLSITVRKPSSVTFTLDDLEQRRFFSETRGDNESISTGEQDLVALYRAGRFKDFLREAV
IARKNIIISGATGSAKTTLSKALIKHIPQHERIISIEDTPELVIPQPNHVRLFYSKGAQGLSGAGPKELLESCLRMRPDR
ILLQELRDGTAFYYVRNVNSGHPGSITTVHANSAKLAFQQLTLLVKESEGGRNLEPEDIDRLLKLSIDVIVQCKRMDGRF
GATEIYFRAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
virB11 YP_001610007.1 VirB11 protein Virulence Not named Protein 9e-95 58
vblB11 YP_001610351.1 VblB11 protein Virulence Not named Protein 3e-91 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
virB11 YP_006398256.1 type IV secretion system protein VirB11 VFG2240 Protein 2e-93 59
virB11 YP_006398256.1 type IV secretion system protein VirB11 VFG2218 Protein 2e-61 48
virB11 YP_006398256.1 type IV secretion system protein VirB11 VFG0024 Protein 2e-50 41