|
Name : USDA257_c29060 (USDA257_c29060) Accession : YP_006398234.1 Strain : Sinorhizobium fredii USDA 257 Genome accession: NC_018000 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 3053125 - 3054825 bp Length : 1701 bp Strand : - Note : - DNA sequence : ATGACCTCGAAGCCTGTGGATCTTCCTGCGGACCTTGCGAGCGCCTATCTGGCGCTGCTTTCCGAGCGTGAGATGTTGCA GGCTGAACGTGATGTCGTTGTTGCCGAGCGCGATACCGTCGTCGCCGAGCGGGACATTGCGGTGGCGCAAGCCGCCAATG CGCAGGCCATGCTGTCCGACAGCGAGGCCGTGATTGCCAGTCTGGAGCTGGCGATCGAAAAGCTGAAGCGCGAACTGCGC GGAAAGCGATCTGAGCGCACGGCGCGCCTGATCGACCAGATGGAATTGCAGCTCGAAGAACTGGTGATGGCGGCGACGGA GGATGAAGCCGCAGCGCAGGCGGCTGCCGCCAAGACCTCGAGCGTGCGTTCGTTCACGCGCAAACGACCGGTACGAAAGC CGTGGCCGGAGGATATCGAGCGCGAGCGCGTGGTCATCGATCCCCCGGCCACTTGCGCATGCTGCGGTGGATCACGGCTT TCAAAGCTGGGCGAAGACGTCACCGAGACGCTGGAAGAGATTCCGCGTCGGTTCAAAGTGATCGAGACGGTGCGGGAGAA ATTTACCTGCCGAGACTGCGAGGCGATCAGCCAGCCGCCGGCGCCGTTCCATGCCACGCCGCGCGGCTTCATCGGTCCTC ATCTGCTGGCGACGATCCTCTTTGACAAGTTTGGCATGCATAGCCCTCTCAACCGCCAGAGCACCCGGTTCAAATGCGAG GGCATCGAGCTTTCGACCTCGACGCTGGCCGACCAGGTCGGGTATGGAACGGCCGCGCTCCTGCCGATCTTTGATCTGAT CGAGACGCATGTCTTCGCGGCCGAGCGCCTTTTTGGCGATGACACCACCATCCCCATTCAGGCCAAAGACAAATGCACGA CCGGGCGAATATGGACCTACGTGCGCGATGACCGGTCCTACGGCGGCGCGGCAGCGCCGGCGGCCATATACTATGCGTCG AGCGACCGCCGCGGCGAGCATCCGCAGAAGCACCTGGCCGGGTATGGCGGCATTCTGCAGAGTGATTGCTACAATGGCTT CGAGCCGCTCAGTGTCGCCGAAAAGAAAGCGGTACCGATCACCTTCGCCTTTTGCCATGCGCATGCGCGGCGCAAATTCT TTGAACTGGCCGACATCCAGAAAAATGCCCGCGACCGCAAACGCAAGGGCAAGCCGATCTCGCCGATCGCCCTGGAGGCC GTCCAACGGTACGATGCGCTGTTTGAGATCGAACGCGAGATCAATGGATTGAGCGCCGCAGAACGGTTGGCCGGACGGCA GGAAAAGAGCAAGCCGCTGTTCGATGACATGCACGAGTGGCTGAAACGGGAGCGCGCCACGCTCAGCAAATCGTCCGAGG TGATCGAGCCGATCGATTACATGCTGAAGCGATGGGATGGTTTTGCCCGTTTCCTCGAAGATGGCCGGATTTGTCTCACG AACAATACGGCCGAGCGCGCTCTGAGAGGAATTGCACTCGGGCGTCGAAACTGGACCTTCGCCGGCTCCCAGCGTGGGGC CGATCGTGCCGCCATCATGCTCTCCGTCATCACGACCTGCCGTCTCAACGACGTCGACCCAAAGGCGTGGCTCGCCGATG TGTTCGCCCGCATCGCCGATCTTCCCGTCTCCCGCCTGCACGAACTGCTGCCTTGGCAATGGAAGGCACAGCAAGGGACC GCTATCGCGGCGGCCGGGTAA Protein sequence : MTSKPVDLPADLASAYLALLSEREMLQAERDVVVAERDTVVAERDIAVAQAANAQAMLSDSEAVIASLELAIEKLKRELR GKRSERTARLIDQMELQLEELVMAATEDEAAAQAAAAKTSSVRSFTRKRPVRKPWPEDIERERVVIDPPATCACCGGSRL SKLGEDVTETLEEIPRRFKVIETVREKFTCRDCEAISQPPAPFHATPRGFIGPHLLATILFDKFGMHSPLNRQSTRFKCE GIELSTSTLADQVGYGTAALLPIFDLIETHVFAAERLFGDDTTIPIQAKDKCTTGRIWTYVRDDRSYGGAAAPAAIYYAS SDRRGEHPQKHLAGYGGILQSDCYNGFEPLSVAEKKAVPITFAFCHAHARRKFFELADIQKNARDRKRKGKPISPIALEA VQRYDALFEIEREINGLSAAERLAGRQEKSKPLFDDMHEWLKRERATLSKSSEVIEPIDYMLKRWDGFARFLEDGRICLT NNTAERALRGIALGRRNWTFAGSQRGADRAAIMLSVITTCRLNDVDPKAWLADVFARIADLPVSRLHELLPWQWKAQQGT AIAAAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| st57 | CAC81895.1 | ST57 protein | Not tested | LEE II | Protein | 3e-72 | 41 |
| tnp | AEA34686.1 | transposase | Not tested | Not named | Protein | 5e-76 | 41 |
| Z5098 | NP_290249.1 | prophage-associated protein | Not tested | LEE | Protein | 3e-75 | 41 |
| unnamed | ACU09439.1 | IS66 family element transposase | Not tested | LEE | Protein | 5e-75 | 41 |
| unnamed | CAC39285.1 | hypothetical protein | Not tested | LPA | Protein | 2e-75 | 41 |
| unnamed | AAC31494.1 | L0015 | Not tested | LEE | Protein | 2e-75 | 41 |
| ECs4547 | NP_312574.1 | hypothetical protein | Not tested | LEE | Protein | 7e-75 | 41 |
| Z4337 | NP_289562.1 | hypothetical protein | Not tested | OI-122 | Protein | 3e-75 | 41 |
| unnamed | CAI43806.1 | hypothetical protein | Not tested | LEE | Protein | 5e-75 | 41 |
| BCAM0248 | YP_002232880.1 | putative transposase | Not tested | BcenGI11 | Protein | 4e-73 | 41 |
| unnamed | AAL57570.1 | unknown | Not tested | LEE | Protein | 1e-75 | 41 |
| aec53 | AAW51736.1 | Aec53 | Not tested | AGI-3 | Protein | 5e-73 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| USDA257_c29060 | YP_006398234.1 | hypothetical protein | VFG0793 | Protein | 1e-75 | 41 |
