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Name : clpV (USDA257_c28650) Accession : YP_006398193.1 Strain : Sinorhizobium fredii USDA 257 Genome accession: NC_018000 Putative virulence/resistance : Virulence Product : protein ClpV Function : - COG functional category : - COG ID : - EC number : - Position : 3007099 - 3009831 bp Length : 2733 bp Strand : + Note : - DNA sequence : ATGCAGCCGAACATGTCTTCTCCAAGCTTCAAGCGCAAGGAACTGGTCGGCAAGCTCAACCCCGTTTGCCTGCGTGCGTT CAAGGCGGCGGCGGACGCGGCCAAGCTTCGCGGCAATCCCTATGTTGAACTCGTTCACTGGATCGAACAACTGGCACTTG TCGACCGTGCCGATTTTCAGTTGATCCTGAGAGATGCCGGCGTGGATCTCGGCCGCCTCGCCGCCGACATGGCAAGGGCG ATAGACAAACTACCCTATGGCGCGACCTCGATCGAGGAGTTTTCCGACCACATCTTTCACGCCATCCAGGAGGCGTGGAG CCTCGCCAGCCTGCAGTTCGGATCCGAAGAGGTGCGTGGAGCCTTTGTCCTCATAGCCTCAAGGAAGTTGCCCGTGCTGG ACGGGCTTTTATCGAAGATCAGCGTTGAATTCGATCGGATCGATGCAGACTCCGTCATCGCCCGGTTTGACGACGTCCTT GCTGGATCACTTGAAAGTACCCGCAGGGAAGAGACTCCCGAACCATCCCGGAAAAGACGCCCCTCAGGGGCTGAGTCCGC ATTGGCGAAATATGCCGTGGACCTCACTCGACGTGCACGCGACGGAAAAATTGACCCGGTTCTGGGCCGCGACCCAGAGA TACGGCAGATCATCGACATCCTCATGCGTCGCAGACAGAACAACCCGATCCTGACGGGCGAAGCCGGTGTGGGTAAAACC GCGGTCGTCGAAGGCTTTGCTCTGCGCCTTGCCGCAGACGATGTGCCGCCGCCGCTCAAAGAGGTGTCGCTTCACATGCT CGACATCGGCTTGATGCAGGCGGGGGCGAGCGTCAAAGGTGAGTTCGAAAGGCGGCTGAAGACAATTATCGATGAAGTTC AGGCATCGGAAACACCCATTATTCTTTTCATCGACGAAGCTCACACTCTGATCGGGGCAGGCGGTGCAGCGGGAACAGGA GACGCCGCAAATCTTCTTAAACCCGTATTGGCGCGCGGCGAGCTTCGCACGGTCGCTGCAACGACCTGGGCCGAATACAA GCAGTACATTGAGAAAGACCCCGCTTTGACGCGACGTTTCCAGGTGGTCAAGGTCGAAGAGCCCGATGAAGAGGGCGCCG TCTTGATGTTGCGCGGTGTGGCAGGCGTGTTGGAGAAGCACCATCAGGTGCAGATTCTCGACGAGGCGATCGAGACGGCC GTCAGCCTTTCGCATCGCTATATCCCGGCGCGCCAACTGCCCGACAAGGCGGTCAGCCTCCTCGATACCGCATGCGCGCG CGTGGCTGTATCGCAGCACGCCACGCCGGCGGAAGTCGAAGACCTTCTGCGACGCAAGCAGTCTCTTGAGATCGAAGAGG CGATCATCGGGCGCGAAGGCGCGATCGGCATCGAAATTGAGGACCGCCAGGCCAAGGTTGCAGCCGCTCTTGCCGAAACC GAATCCGCTTTGCTAGCCGCAAAGGCTCGCTGGGAAAAGGAGCAGGCCATGGTCTCTGAAATTCTCGATCTGCGGGCGAG GCTGCGCGGAAAGGGAGTCGAACTCGACCATGCGTTGGCCGACGGGGCGGCAGGCGATCAAGCGGCAGCAACCCCAATTG TGGATGAGCCCGCGTCGGGAGCCAGCGAAGGAGCGATCGCCGACCAGAATTCGGACCTTGTGCGGCTCAAGACGCTGATG GCGGAACTTGCCGATGCACAGGGTGAAACCCCGCTCATATTGCTTTCCGTGGACAGGAATGCCGTGGCCTCGGTGGTACA GGATTGGACAGGTATACCGGTTGGCAGGATGCTGACCAGCCAGACCGAAAAGGCGTTGCAGCTGGCAAACGTTCTGTCAG AGCGTGTCGTCGGTCAGGACATCGCGATGGAGTCGATCGCTCGGCGCGTACAGACCAGCCGAGCCGGATTAGGCTCTCCC GAAAAGCCCGTCGGTGTCTTTCTGCTGTGCGGCCCGTCCGGGGTCGGTAAGACGGAAACTGCACTGGCTCTCGCCGAGGC GCTCTATGGCGGCGAACAGAATCTGATCAGCATCAACATGTCCGAGTTTCAGGAGGCCCATACAGTCTCCACTCTCAAGG GTGCGCCTCCGGGCTATGTTGGCTATGGCAAGGGGGGCGTCCTGACCGAAGCCGTCAGACGACGACCCTATTGTGTTATT TTGCTCGATGAAGTCGAGAAGGCACATCCGGATGTGCACGAGATCTTTTTCCAGGTATTTGACAAAGGGATGATGGACGA CAGCGAGGGTCGACGGATCGACTTCCGCAACACTCTCATACTGCTGACCTCGAACGTTGGTTCAGACGCCATCATGAAGC TTACCGATGGAGGCCGGATGCGGCCCCCACCTGAGGAGTTGGAAGCCGTACTGCGGCCGCAATTGCTGAAGGTATTTCCG CCGGCATTTCTCGGACGGGTTATTGTCATCCCCTATTATCCGCTCTCCGATGCGATGATCGAGGCAATAACACGACATCA CTTCGGGAAAATCGCGCGCCGGTTACGCGCCAGCCATGATGCTGAGCTGGTCATCGAGGACGGAGTTCGGGAATTGGTCA AGGCGCGTTGTACCGAGGTCGAATCGGGAGGTCGCATGATCGACGCGATCCTGACCAACACGCTTCTACCGGCGTTGAGC AAAGGCGTTCTGAATTGGTCGCTCGAAGGCAAACGCCTGACCAAGGTCACGGTCGGCGCATCTGAGGAAGGCTTCACCTA CTCGTTCGAATGA Protein sequence : MQPNMSSPSFKRKELVGKLNPVCLRAFKAAADAAKLRGNPYVELVHWIEQLALVDRADFQLILRDAGVDLGRLAADMARA IDKLPYGATSIEEFSDHIFHAIQEAWSLASLQFGSEEVRGAFVLIASRKLPVLDGLLSKISVEFDRIDADSVIARFDDVL AGSLESTRREETPEPSRKRRPSGAESALAKYAVDLTRRARDGKIDPVLGRDPEIRQIIDILMRRRQNNPILTGEAGVGKT AVVEGFALRLAADDVPPPLKEVSLHMLDIGLMQAGASVKGEFERRLKTIIDEVQASETPIILFIDEAHTLIGAGGAAGTG DAANLLKPVLARGELRTVAATTWAEYKQYIEKDPALTRRFQVVKVEEPDEEGAVLMLRGVAGVLEKHHQVQILDEAIETA VSLSHRYIPARQLPDKAVSLLDTACARVAVSQHATPAEVEDLLRRKQSLEIEEAIIGREGAIGIEIEDRQAKVAAALAET ESALLAAKARWEKEQAMVSEILDLRARLRGKGVELDHALADGAAGDQAAATPIVDEPASGASEGAIADQNSDLVRLKTLM AELADAQGETPLILLSVDRNAVASVVQDWTGIPVGRMLTSQTEKALQLANVLSERVVGQDIAMESIARRVQTSRAGLGSP EKPVGVFLLCGPSGVGKTETALALAEALYGGEQNLISINMSEFQEAHTVSTLKGAPPGYVGYGKGGVLTEAVRRRPYCVI LLDEVEKAHPDVHEIFFQVFDKGMMDDSEGRRIDFRNTLILLTSNVGSDAIMKLTDGGRMRPPPEELEAVLRPQLLKVFP PAFLGRVIVIPYYPLSDAMIEAITRHHFGKIARRLRASHDAELVIEDGVRELVKARCTEVESGGRMIDAILTNTLLPALS KGVLNWSLEGKRLTKVTVGASEEGFTYSFE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 5e-124 | 45 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 4e-124 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpV | YP_006398193.1 | protein ClpV | VFG2076 | Protein | 0.0 | 58 |
| clpV | YP_006398193.1 | protein ClpV | VFG2084 | Protein | 5e-134 | 42 |
