Gene Information

Name : USDA257_c28620 (USDA257_c28620)
Accession : YP_006398190.1
Strain : Sinorhizobium fredii USDA 257
Genome accession: NC_018000
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3003051 - 3003587 bp
Length : 537 bp
Strand : -
Note : -

DNA sequence : 
ATGAGCGAAACTAAGGCGAAGGTAATTGAACGAAACCGGGCGCCTCGCGTCCAGATCGCCTATGAAGTGGAAACATACGG
CAGCCCGACGACGATCGAATTGCCGTTTGTGATGGGCGTGATGGCTGATCTGGCCGGCGCCTCCGAGACACCAGAGGCGC
GCAAGTCCGTACGGGACCGCACGTTTGTCGAGACCGACGCAAACAGGTTCGGCCGTTTCATGGAAGCGCTCAGCCCCCGC
GTCAAAGCTCGGGTGAAGAACACTCTGCCCCAGCCTCCGGGCGAAGAACGCGATGAAGAGCTTGCGGTAGACCTTACCTT
TACGAGCATCGCCGACTTCACGCCGGATCGTGTTGCCGAACAAGTCCCGCAGCTTGCCGAGCTTTTGAGGATGCGCCGCC
AGCTTGAGGAACTGCTAGGTTTCATGGATGGTCGCATCGACGCCGAAAAACGCATCGCGCAGCTTTTGAACAATGAGCCC
CTCATTGCAAAGATCGCAGACCAGGCGATCGACGATAGCAGCAAATCGGAGGTCTGA

Protein sequence : 
MSETKAKVIERNRAPRVQIAYEVETYGSPTTIELPFVMGVMADLAGASETPEARKSVRDRTFVETDANRFGRFMEALSPR
VKARVKNTLPQPPGEERDEELAVDLTFTSIADFTPDRVAEQVPQLAELLRMRRQLEELLGFMDGRIDAEKRIAQLLNNEP
LIAKIADQAIDDSSKSEV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0297 NP_454879.1 conserved hypothetical protein Not tested SPI-6 Protein 5e-23 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
USDA257_c28620 YP_006398190.1 hypothetical protein VFG2069 Protein 3e-23 44