Gene Information

Name : siaT2 (USDA257_c27900)
Accession : YP_006398118.1
Strain : Sinorhizobium fredii USDA 257
Genome accession: NC_018000
Putative virulence/resistance : Virulence
Product : sialic acid TRAP transporter permease protein SiaT
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2930208 - 2931488 bp
Length : 1281 bp
Strand : +
Note : -

DNA sequence :
ATGACGACGCTCTTCGGGGGATGGTTTGCTCTTCTGGTCGCCGGCATGCCGGTAGGCTTCACACTGATCGTGGCGGCTCT
CGCCTATATGCTCTGGCAGGGCACGGGTCTCAATTTTGCTGGGCAGCGCATGGTCGCTGGCCTCAATAGCTTCCCGCTCC
TTGCGGTTCCCTTCTTTATTCTCACCGCCCAGCTGATGAACGTTTCCGGCGTGACCGAGCGCATTTTCGATTTCGCCAAG
GCCCTTGTCGGCCATATCCGCGGCGGACTCGGCCATGTGAACATCATGGCGAGCGTGATGTTCTCGGGCATGTCAGGCTC
GGCTGTTGCCGATGCGGCCGGTCTTGGTCAGCTTGAGATCAAGGCAATGCGCGACGCCGGCTATGACGAGCAGTTCTCCG
GTTCGATCACGGCCGCATCTGCGATCATCGGACCGCTTATCCCGCCCTCCATCCCTCTCGTGGTCTATGGCGTGATTGCC
AACACCTCAATCGGCGGGCTTTTCCTGGGCGGTATCGTGCCGGGCCTCCTGTGTGCGGCCTCGCTGATGGTCATGGTCTA
TGTCATCGCCTGGCGGCGGAACTATGCGACAGAGCAGCGCGCCAGCCTTCGCCGGGTCTGGTCCACCTTCTGGCGAGCGC
TCTTTCCGCTAATGACGCCCTTCATTATTATTGGCGGCATCTTTGCGGGGATCTTCTCGCCGACAGAGGCTGCCGTCGTT
GCGGCCAGCTATGCGCTCTTGCTCGGCGTCGTAGTCTACCGCGAAATTACTTTCGCCAGACTCGTGACGGTGCTCCGCGA
GACGGTCGGCCATACGGCCGCCGTCGGCCTCCTCATCATGGGCGTGTCGCTATTCGGCTATGTGATCGCGCGGGAGCAGG
TGCCTCAGCACGTCGCCGCGTTCTTCCTCAACTATGCGGATGACCCGCTGACATTCCTCATCCTCGTGAACCTCATGCTG
CTTGCACTCGGCACCTTCATCGAGGCGTTGGCGATCCTGCTGCTCATCGTGCCGGTGCTGGTGCCGACCGCGCTTCAATA
CGGTATAGATCCCGTCCATTTCGGTGTGGTGGTGGTGTTCAACCTGATGATCGGCATATTGACACCGCCGATGGGAGTGG
CGCTTTTCGTGGTCTCGAAAGTCGCCAACATTCCCTTCGGTGTGCTTGCCCGCGGTATCCTTCCACTGCTCGTTCCGCTG
ATCATCGTCCTGGTGCTGATCACCGTCTTTCCAGCCCTCGTCACCTTCATTCCCGACCAGATGCTCGGAGCTGCTCGGTG
A

Protein sequence :
MTTLFGGWFALLVAGMPVGFTLIVAALAYMLWQGTGLNFAGQRMVAGLNSFPLLAVPFFILTAQLMNVSGVTERIFDFAK
ALVGHIRGGLGHVNIMASVMFSGMSGSAVADAAGLGQLEIKAMRDAGYDEQFSGSITAASAIIGPLIPPSIPLVVYGVIA
NTSIGGLFLGGIVPGLLCAASLMVMVYVIAWRRNYATEQRASLRRVWSTFWRALFPLMTPFIIIGGIFAGIFSPTEAAVV
AASYALLLGVVVYREITFARLVTVLRETVGHTAAVGLLIMGVSLFGYVIAREQVPQHVAAFFLNYADDPLTFLILVNLML
LALGTFIEALAILLLIVPVLVPTALQYGIDPVHFGVVVVFNLMIGILTPPMGVALFVVSKVANIPFGVLARGILPLLVPL
IIVLVLITVFPALVTFIPDQMLGAAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1777 NP_231412.1 hypothetical protein Not tested VPI-2 Protein 4e-86 62
VC0395_A1375 YP_001217318.1 hypothetical protein Not tested VPI-2 Protein 4e-86 62
VPI2_0025c ACA01842.1 TRAP dicarboxylate transporter DctM subunit Not tested VPI-2 Protein 3e-86 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
siaT2 YP_006398118.1 sialic acid TRAP transporter permease protein SiaT VFG1110 Protein 2e-86 62