Gene Information

Name : USDA257_c25230 (USDA257_c25230)
Accession : YP_006397856.1
Strain : Sinorhizobium fredii USDA 257
Genome accession: NC_018000
Putative virulence/resistance : Unknown
Product : transposase for insertion sequence element IS1081
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2648685 - 2649779 bp
Length : 1095 bp
Strand : +
Note : -

DNA sequence :
ATGACCGATGCCATGATGAACCTGCGCATGCTCGTGGAGAAGACCCCCGACGCCGATATTCTGCGCGAGATGATCGGCTT
TGCCGCTGAACGGCTGATGGAGATGGAGGTGGGTGCCTCCACCGGCGCCGGCTATGGCGAGAAGAACCCGTTGCGCACGG
CCCAGCGCAACGGATATCGCGACCGGGACTGGGAGACGCGAGCCGGCACCGTCGAGCTGCGCATCCCCAAGCTCAGGAAA
GGCACCTACTTCCCTTCGTTCCTGGAGCCGCGGCGCATGGCTGAGAAGGCGCTGACGGCGGTGATCCAGGAGGCTTACAT
TCAGGGCATCTCGACCCGCTCGGTCGACGACCTGGTCAAGGCCATGGGCATGAGCGGCGTCTCCAAGAGCCAGGTCAGCC
GGCTCTGCGAGGAGATCGACGGCAAGGTGAAGGCCTTTCTCGACCGGCCGATCGAGGGCGACTGGCCATATCTGTGGGTC
GATGCCACCTACCTGAAGGTGCGCCGCGGCGGCCGCATCGTCTCCGTCGCTGTGATCATCGCCGTCGGCGTCAACACGGA
CGGCCGGCGCGAGGTGCTGGGCATGGAGGTCGGCACATCGGAAGCCGAGCCGATCTGGACAGAGTTCCTGCGCAAGCTAA
CTCGGCGTGGCCTGCGCGGCGTCAGGCTCGTCGTTTCCGATGCCCACGAAGGCATCAAGGCGGCGGTTTCCAAAGTTCTG
TGCGCCACCTGGCAGCGCTGCAGGGTTCATTTCGCTCGCAACGTGCTGGCGCATGCCGGAAAGAGTGGCCGTCGTGTCGT
GTCGGCCTTCATTGCCACCGCCTTCGCCCAGGAGACGGCAGAGGCGGCAAGCCTGCAATGGCGCGCCGTCGCCGACCAGA
TCCGCCCGAAAGTGCCGAAGCTCGCCGCCATCATGGACGAGGCCGAGCACGACGTCCTCGCCTACATGAGCTTCCCCAAG
GAGCACCGCGGTCAAGCTACACTCGATCAATCCGATCGAGCGACTCAATGGCGAGATCAAGCGGCGCACCGACGTCGTTG
GCATCTTTCCCAACGACGATGCCATCGTCCGCCTCGTCGGCGCATTGCTGCTTGA

Protein sequence :
MTDAMMNLRMLVEKTPDADILREMIGFAAERLMEMEVGASTGAGYGEKNPLRTAQRNGYRDRDWETRAGTVELRIPKLRK
GTYFPSFLEPRRMAEKALTAVIQEAYIQGISTRSVDDLVKAMGMSGVSKSQVSRLCEEIDGKVKAFLDRPIEGDWPYLWV
DATYLKVRRGGRIVSVAVIIAVGVNTDGRREVLGMEVGTSEAEPIWTEFLRKLTRRGLRGVRLVVSDAHEGIKAAVSKVL
CATWQRCRVHFARNVLAHAGKSGRRVVSAFIATAFAQETAEAASLQWRAVADQIRPKVPKLAAIMDEAEHDVLAYMSFPK
EHRGQATLDQSDRATQWRDQAAHRRRWHLSQRRCHRPPRRRIAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp7109-24 YP_001800852.1 transposase for insertion sequence Not tested Not named Protein 2e-39 47