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Name : gabD1 (USDA257_c02450) Accession : YP_006395600.1 Strain : Sinorhizobium fredii USDA 257 Genome accession: NC_018000 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase [NADP+] GabD Function : - COG functional category : - COG ID : - EC number : 1.2.1.79 Position : 274867 - 276363 bp Length : 1497 bp Strand : + Note : - DNA sequence : GTGCAACCAACTCCCGCGCAAAAAACAACTCCGCTTGTCTCTCCCGCCTCGACTGCCGTAGTCCGCGATGCTCCTACGCA ACTGTTCATCGGCGGCGAATGGGTTTCTGCAAAAGAAGATCGCACCTTTGAAGTGGTCGACCCCTCGACCGGAGATGTGA TCGCCACCGTTTCCGATGGCGATGTCGCCGATGGAATATCCGCGGTCGACGCAGCGGAAATGGCCGCTGCGGCTTGGAAG GCGACCTCGCCGCGGCGTCGTTCGGATGTTCTGATGAAGTGTTTTCACCTTGTGCTCGAACAGGCCGAATGGCTGGCACA ACTGATCACCGTGGAAAACGGCAAGGCACTCGCGGACGCCAGGTCGGAGGTCTCCTATGCCGCCGAATTTTTCCGCTGGT ACGCGGAAGAAGCTGTACGGGCACCGGGCGAATTCGGACCTGCACCTTCCGGCGCCAATCAGATCATCGTCAACCATGAG CCGATTGGTATCGCCGTGTTGGTGACGCCTTGGAACTTCCCGGCAGCAATGGCGACCCGAAAGATGGCACCCGCACTGGC CGCGGGCTGCACGTGCATCCTGAAGCCCGCAGCGGAGACCCCGCTTACGGCGCTGGCGATCGGCGAGATTATGCGGCAGG CCGGCGTTCCTGCTGGAGTGGTCAACATCGTGACAACGAGGAAAGCGGGCTCCGTGGTCAGCGCCATGCTGCATGACGAG CGGGTACGGAAGCTGTCGTTCACCGGCTCGACAGGCGTCGGCCGGACACTGCTGCGGGAGGCTGCGGACCAGGTTGTCAG TTGTTCGATGGAACTCGGCGGCAATGCGCCATTCGTTGTATTCGACGATGCCGACCTGGAGACGGCTGTCGCTGGAGCCA TGGTGGCCAAGATGCGCAACGGCGGCGAGGCATGTACTGCCGCCAACCGCTTCTATGTGCAGAAAGGGATCCTGGCGGAC TTCACCCGGCGGTTTGCGGAAGAGATGGCCGCGATCAAGGTCGGACCAGGACTGGCGCCGGACACGCAGCTTGGGCCACT GATCACCGAGGCCGCGCTCGCCAAGGTGGAACGCCTGGTGGACGACGCCGTTGCCAAGGGAGCCCGACTGGTTACCGGCG GCAGCCGGTTGAACGGCGACGGCTTCTACTATCCGCCTACCGTACTTGCAGACGTTTCTCCCGATGCCGAGGTACTTCGC GAAGAAATCTTCGGGCCGGTTGCGCCAATCATTGCGTTTGAAACCGAGGACGAGGTCGTCCAGATGGCGAACGACACCGA ATACGGGCTGGTGTCCTATGTGTTCAGCAGCGACCTCAAACGCGCGCTTGCGGTCGCCGGACGGCTGGAAAGCGGCATGG TCGGAATCAACCGAGGCGTCGTATCCGACGCTGCCGCACCGTTTGGCGGCATGAAGCAGAGCGGGCTCGGCCGGGAGGGA AGCCACCACGGCATGCTCGAATATCTCGAAACAAAGTACATCGCCGCAAGCTGGTAG Protein sequence : MQPTPAQKTTPLVSPASTAVVRDAPTQLFIGGEWVSAKEDRTFEVVDPSTGDVIATVSDGDVADGISAVDAAEMAAAAWK ATSPRRRSDVLMKCFHLVLEQAEWLAQLITVENGKALADARSEVSYAAEFFRWYAEEAVRAPGEFGPAPSGANQIIVNHE PIGIAVLVTPWNFPAAMATRKMAPALAAGCTCILKPAAETPLTALAIGEIMRQAGVPAGVVNIVTTRKAGSVVSAMLHDE RVRKLSFTGSTGVGRTLLREAADQVVSCSMELGGNAPFVVFDDADLETAVAGAMVAKMRNGGEACTAANRFYVQKGILAD FTRRFAEEMAAIKVGPGLAPDTQLGPLITEAALAKVERLVDDAVAKGARLVTGGSRLNGDGFYYPPTVLADVSPDAEVLR EEIFGPVAPIIAFETEDEVVQMANDTEYGLVSYVFSSDLKRALAVAGRLESGMVGINRGVVSDAAAPFGGMKQSGLGREG SHHGMLEYLETKYIAASW |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 2e-105 | 48 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 6e-96 | 45 |
