Gene Information

Name : USDA257_c24490 (USDA257_c24490)
Accession : YP_006397782.1
Strain : Sinorhizobium fredii USDA 257
Genome accession: NC_018000
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2574595 - 2575362 bp
Length : 768 bp
Strand : -
Note : -

DNA sequence : 
ATGACAAAGAAAGTACTCCTCGTCGGCGAAAGCTGGGTCAGCTCCGCCACGCACTACAAGGGCTTTGACCAGTTCGGCAG
CGTCACCTTCCACCTCGGCGCCGAGCCGCTAGTCAAGGCGCTTGCCGGCAGCGCATTCGAGCTGACCTACATGACCGCGC
ACGAGGCCGTGGACAAGTTCCCATACGAGATGGCGGACCTCGACGCCTTCGACGCAATAATTCTTTCCGATATCGGCGCC
AACTCGCTCCTTCTACCGCCGGAGGTGTGGCTGCATTCTCGCACCGTGCCCAACCGCTTGAAGCTCATCAAAGCCTGGGT
GGAAAAGGGCGGCGCGCTATTGATGGTAGGCGGCTACTTCTCCTTCCAGGGCATCGACGGAAAGGCCCGCTGGCGGCGGA
CACCCGTTGAAGACGCACTGCCCGTTACCTGCCTGCCCTATGATGATCGCGTCGAGATCCCGGAGGGCGCAGTCGCCGAC
ATAATCAAGCCGGAGCACCCGGTAATGGCCGGACTTACGGGCAATTGGCCGTTGCTCCTCGGCGTTAATGAGGTGGGGGT
TCGCGACGGCGCTGAAGTGATTGCCCGCCTTCCGGAAGACCAAGGCGGCCATCCCTTGCTCGTTCTCGGCAGCTACGGCA
AGGGCCGCACCGCTGCCTGGACCTCGGATATCGGTCCGCACTGGCTGTCACCGGCCTTCTGCGAATGGGAAGGCTACGGC
CGTCTGTGGAAGAATATTCTTGGCTGGATGACGGAGGGCGGGCGCTGA

Protein sequence : 
MTKKVLLVGESWVSSATHYKGFDQFGSVTFHLGAEPLVKALAGSAFELTYMTAHEAVDKFPYEMADLDAFDAIILSDIGA
NSLLLPPEVWLHSRTVPNRLKLIKAWVEKGGALLMVGGYFSFQGIDGKARWRRTPVEDALPVTCLPYDDRVEIPEGAVAD
IIKPEHPVMAGLTGNWPLLLGVNEVGVRDGAEVIARLPEDQGGHPLLVLGSYGKGRTAAWTSDIGPHWLSPAFCEWEGYG
RLWKNILGWMTEGGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_1077 YP_853097.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 4e-46 44
SC1402 YP_216389.1 hypothetical protein Not tested SPI-2 Protein 1e-44 41
orf245 NP_460346.1 hypothetical protein Not tested SPI-2 Protein 1e-44 41
ORF 245 CAB37418.1 - Not tested SPI-2 Protein 8e-45 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
USDA257_c24490 YP_006397782.1 hypothetical protein VFG0482 Protein 5e-45 41