|
Name : yejF2 (USDA257_c22830) Accession : YP_006397621.1 Strain : Sinorhizobium fredii USDA 257 Genome accession: NC_018000 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein YejF Function : - COG functional category : - COG ID : - EC number : - Position : 2390908 - 2392578 bp Length : 1671 bp Strand : + Note : - DNA sequence : ATGGCAGCGATCGAAAGCATTGTCCCGGCACCCGACGAACGGATTGACCGCCACACCAAGGATACGCGGCCGGTCATCGA CGCCCGCAAGGTGGCCGTCACCTTCAAGGTGGAGCACGGCACCGTCGAGGCAGTGAAGGACGTCTCCTTCCAGCTCTATC GCGGTGAGACCGTGGCGATCGTCGGCGAGTCCGGATCGGGCAAGTCGGTGACGGCGCGCAGCATCATGGGGCTGCTCTCG AAGCGTGCCACGGTCGCCTCGCATTCGCGCATCGAATATGACGGCCGCGACGTCCTGAAATTCTCGGCGCGGCAGCGCCG GGCGCTGCGCGGCGACCGCATCTCGATGATCTTCCAGGAGCCGATGAGCTCGCTGAACCCGGTCTATACGATCGGCAGCC AGATCATCGAGGCGATCCGGGCGCATCGCCGGATGAGCCGCCGCGCGGCTGCGGCCCGCGCGCTGGAATTGCTGCGCCAC GTGCAGATCCCGGATCCCGAGGCACGGCTCAACCAGTATCCGCATCAGCTTTCCGGCGGCCAGCGCCAGCGCGTGATGAT CGCCATGGCGCTTGCCAACGATCCGGACGTGCTGATCGCCGACGAGCCGACGACGGCCCTCGACGTCACCGTGCAGGCGC AGATCCTCAACCTGATTCGCAAGCTGCAGCAGGATCTCGGCATGGCGGTGATCCTGATCACCCACGACCTGACGGTGGTG CGGCAGTTCTCCGACTATGTCTATGTGATGCAGCTCGGCGAGGTGAAGGAGCACAATACGACGGCGGCGCTGTTTGCCAA CCCGCAGCATGCCTATACGCGACGGCTGCTCGCCTCAGAACCGTCGGGCTCGGCGAAACCGTTGTCCGACAATACACCGA TCGTGCTTGACGGCCGCAACGTCCGGGTCTCGTTCATGCTGAAGAAGGGCGGCTTCTTCAAGCCGGAGCTGAAGGAGCTC ATCGCCGTCGACAGCCTCAGCCTCAATCTTCGCCGGCATGAGACGCTCGGCCTCGTCGGCGAGTCCGGTTCCGGCAAGAC CACCTTCGGCCAGGCGCTGATCCGGCTGATCAACACCGAGGGCGGCGAGATCTATTTCGATGGCGAGCCGATCCATAACA AGGACCGCTGGGGCATGCGCCCGTTGCGGTCGCGGATCCAGATCGTCTTCCAGGATCCGTTCTCCTCGCTCAATCCCCGC ATGTCGATCGGCCAGATCATCGAGGAGGGGCTGATCGTCAACGGCATCGGCGAGAACCGCAAGGACAGGCTCGCCCGTGT CCAGGATGCGCTGGTCAGCGCCGGCATGCCGGGCAATATCCTGTCGCGCTTTCCGCATGAATTTTCCGGGGGCCAGCGCC AGCGCATCGCCATTGCCCGTGCCATCGCGCTCGAGCCGGAATTCATCCTGCTCGACGAGCCGACCTCAGCGCTCGATCTC TCGGTGCAGGCCCAGATCATCGACCTGTTGCGCAAGCTGCAGGACGAGCGGGGGCTCAGCTACCTTTTCATCTCCCACGA CCTGAAGGTTGTGCGCGCGCTCTGCCACCGCGTCGTGGTGATGCAGCACGGCAAGATCGTCGAAGAGGGCCCCGTGAACG AAATTCTTTCCAATCCCAAGACTGCCTATACGGAGCGGCTCGTCAGAGCCGCCTTCGAAGTGGCCGCGTGA Protein sequence : MAAIESIVPAPDERIDRHTKDTRPVIDARKVAVTFKVEHGTVEAVKDVSFQLYRGETVAIVGESGSGKSVTARSIMGLLS KRATVASHSRIEYDGRDVLKFSARQRRALRGDRISMIFQEPMSSLNPVYTIGSQIIEAIRAHRRMSRRAAAARALELLRH VQIPDPEARLNQYPHQLSGGQRQRVMIAMALANDPDVLIADEPTTALDVTVQAQILNLIRKLQQDLGMAVILITHDLTVV RQFSDYVYVMQLGEVKEHNTTAALFANPQHAYTRRLLASEPSGSAKPLSDNTPIVLDGRNVRVSFMLKKGGFFKPELKEL IAVDSLSLNLRRHETLGLVGESGSGKTTFGQALIRLINTEGGEIYFDGEPIHNKDRWGMRPLRSRIQIVFQDPFSSLNPR MSIGQIIEEGLIVNGIGENRKDRLARVQDALVSAGMPGNILSRFPHEFSGGQRQRIAIARAIALEPEFILLDEPTSALDL SVQAQIIDLLRKLQDERGLSYLFISHDLKVVRALCHRVVVMQHGKIVEEGPVNEILSNPKTAYTERLVRAAFEVAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 3e-95 | 43 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 6e-72 | 42 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 6e-72 | 42 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 6e-72 | 42 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 6e-72 | 42 |
