Gene Information

Name : nolT (USDA257_c21580)
Accession : YP_006397497.1
Strain : Sinorhizobium fredii USDA 257
Genome accession: NC_018000
Putative virulence/resistance : Virulence
Product : nodulation protein NolT
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2253426 - 2254226 bp
Length : 801 bp
Strand : +
Note : -

DNA sequence : 
ATGAAGATCTTGCTGCGTTCCCCGGCAATTGCGCGCGGACTGGTGCTCGCATTTATGGTTCTGACGCTGCAAGCCTGCAG
CGTCGACCTCTACACCAACCTCGATGAGCGCGAGGCGAATGAAATGGTCGCGACGCTGCTCGCGAAGGGAATTGCCGCGG
GCCGTGTCGTGCAGAAGGACGGTAAGCTGACGGTTACGGTTGATGAGGATCAATTCTCGCAGGCCGTGACCGTGCTCAAC
ATGGCGGGACTGCCCAAGGAAAAATTTGCCACACTCGGCACAGTGTTCCGGCAGGAGGGCCTTGTCGCCTCGCCAGTGCA
GGAACGCGCGCAGATGATCTATGCGCTCAGCGAAGAGCTTTCCCGCACCGTTTCCGAAATCGACGGCGTCCTGTCGGCCC
GTGTCCACGTCGTCCTGCCCGACAATGACCCGCTGCAGCGCAACGCAATTCCCGCTTCCGCCTCCGTATTCATCCGGCAC
GAAGCGGAGCTCGACGTCAATCCGCTGATCCCGCGGATCAAGACATTGGTCGCCAACAGCATATCGGGCCTTACTTACGA
GAAGGTCTCGGTCGTGCCCGTCGCCAGCCAGCGGACGAGCGAGCCCGTTGCCGCTGCCGAGCTGACGTCCTTCCTCGGGA
TCTGGATGCTGCCGGCGAGCGTCGCCAAGGCCCGGTTGATCTTCGGCTGTCTCCTCGCCGGCCTGCTCGCGGCGATCGGC
TGCCTCGGCTATCTGGCATGGCGAAAGCAGAGCCGGCGCCGGAAGGTCTATCCGCTGCAACCCTATGGCCCGGCGAAATG
A

Protein sequence : 
MKILLRSPAIARGLVLAFMVLTLQACSVDLYTNLDEREANEMVATLLAKGIAAGRVVQKDGKLTVTVDEDQFSQAVTVLN
MAGLPKEKFATLGTVFRQEGLVASPVQERAQMIYALSEELSRTVSEIDGVLSARVHVVLPDNDPLQRNAIPASASVFIRH
EAELDVNPLIPRIKTLVANSISGLTYEKVSVVPVASQRTSEPVAAAELTSFLGIWMLPASVAKARLIFGCLLAGLLAAIG
CLGYLAWRKQSRRRKVYPLQPYGPAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcJ AAT96359.1 HrcJ Virulence S-PAI Protein 2e-28 44
hrcJ AAT96279.1 HrcJ Virulence S-PAI Protein 1e-28 44
hrcJ AAT96320.1 HrcJ Virulence S-PAI Protein 1e-28 44
hrcJ ABA47308.1 HrcJ Virulence S-PAI Protein 2e-27 44
hrcJ AAC35801.1 putative hrp type III secretion pathway protein Virulence Hrp PAI Protein 8e-30 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
nolT YP_006397497.1 nodulation protein NolT VFG0409 Protein 7e-41 46