|
Name : USDA257_c20750 (USDA257_c20750) Accession : YP_006397414.1 Strain : Sinorhizobium fredii USDA 257 Genome accession: NC_018000 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 2171707 - 2173239 bp Length : 1533 bp Strand : + Note : - DNA sequence : ATGACGATGACGGCCGACGAGCTTCCCGACGACCTGAACGCGCTCAAGGCCATGGTGCTTTCGCGCGAGGCGGAGAATGC CCGGCTCCGCCAGATCATCAAGGAATTGCAGCGCCATCGCTTCGGCCGCCGCGCCGAGACGCTACCCGAGGATCAGCTTC TCCTGGGGCTCGAAGAAGCCGAACAGGTCGAGGCGGACGGTCTGGAGGAGAAGGAGCAGGCTTCGAGCGATCTGCGCCGG GAGCGGGCTGCAAAGCGGCGAATGAACCGGGGCGCTCTTCCCGCTCATCTGCCGCGCATCGATGTGGTGGTCGACATCGA GAGTCATGACTGCCCCTGCTGCGGCAACGACCTGCATCGGATCGGCGAGGATGTCAGCGAGAAGCTCGACATCGTGCCGG CCCAGTTCCGCGTTCTGGTGACGCGCCGTCCCAAATATGCCTGCCGTGCATGTGAGGAGGTCGTCGTCCAGGCTGCAGCT CCCGCGCGCCTGATCGAGGGCGGCATTCCGACCGAAGCGACCGTTGCCCAGGTGCTCGTTTCCAAATACGCCGATCACCT GCCTCTTTACAGGCAGGCGCAAATCTACAAGCGCCAGGGGATCGATCTCGACCGCTCGACGCTCGCCGACTGGGTCGGTC GAGCCGCCTGGCATCTGCGCCCGGTTCACCAGAAGCTTCTCGAGCACCTGAAGGCCTCGTCCAAGCTCTTCGCCGACGAG ACGACCGCCCCGGTGCTCGATCCGGGGCGGGGAAAGACGAAGACCGGGCAGCTCTGGGCCTATGCTCGTGACGACAGGCC ATGGCAGGGAGCCGATCCGCCCGGTGTCGTCTATGTCTATGCGCCCGATCGCAAGAGCGAACGGCCGATGGCACACCTCA ATGGCTTCGTCGGCGTCCTGCAGGTAGACGGATACGCGGGTTATCGAGCGCTCGCCGCCGGCAACAGCGTGTCTTTGGCA TTTTGCTGGAGCCATGTGCGTCGGCGCTTCTATGAACTGTCGGCCGCCGGTCCCGCGCCCATCGCCAGCGAAGCGCTCAG GCGTATCGCCGCACTCTACAAAATCGAGGACGATATCCGCGGTATTACCCACGAGGAACGCCGCGCCGTCAGACAGGAAA AGAGCCGCCCGATCACCGACAGTCTCGCGCCTTGGCTGACCGAGCAACTCACCCTTATCAGTCAGAAGACCAAGCTCGCC GAAGCCATCCGCTATACGCTCTCACGTTTGGACGGGCTGACCCGCTTCATCGACGACGGCCGCATCGAGATCGACTCCAA CACCGTCGAGCGTTCCATCAGGCCGATCGCCCTCAATCGGAAGAATGCACTCTTTGCTGGCTCCGATGCGGGCGCTGAAC ATTGGGCTACCATCGCCTCGCTCATTGAAACGGCAAAGCTCAACGGCGTCGAGCCGATGGCCTATCTGACAGACGTGATC ACCAGGGTCGTCAACGGCCATCCCAACAGCCAAATCGACGAGCTGCTGCCGTGGGCCTATGCAGAGAAGCCAGAAACCAA GGCCGTGGCCTGA Protein sequence : MTMTADELPDDLNALKAMVLSREAENARLRQIIKELQRHRFGRRAETLPEDQLLLGLEEAEQVEADGLEEKEQASSDLRR ERAAKRRMNRGALPAHLPRIDVVVDIESHDCPCCGNDLHRIGEDVSEKLDIVPAQFRVLVTRRPKYACRACEEVVVQAAA PARLIEGGIPTEATVAQVLVSKYADHLPLYRQAQIYKRQGIDLDRSTLADWVGRAAWHLRPVHQKLLEHLKASSKLFADE TTAPVLDPGRGKTKTGQLWAYARDDRPWQGADPPGVVYVYAPDRKSERPMAHLNGFVGVLQVDGYAGYRALAAGNSVSLA FCWSHVRRRFYELSAAGPAPIASEALRRIAALYKIEDDIRGITHEERRAVRQEKSRPITDSLAPWLTEQLTLISQKTKLA EAIRYTLSRLDGLTRFIDDGRIEIDSNTVERSIRPIALNRKNALFAGSDAGAEHWATIASLIETAKLNGVEPMAYLTDVI TRVVNGHPNSQIDELLPWAYAEKPETKAVA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| c3563 | NP_755438.1 | hypothetical protein | Not tested | PAI I CFT073 | Protein | 1e-78 | 47 |
| st57 | CAC81895.1 | ST57 protein | Not tested | LEE II | Protein | 2e-84 | 45 |
| BCAM0248 | YP_002232880.1 | putative transposase | Not tested | BcenGI11 | Protein | 1e-94 | 44 |
| Z1131 | NP_286666.1 | hypothetical protein | Not tested | TAI | Protein | 1e-85 | 41 |
| Z1570 | NP_287074.1 | hypothetical protein | Not tested | TAI | Protein | 1e-85 | 41 |
| unnamed | CAC39285.1 | hypothetical protein | Not tested | LPA | Protein | 1e-86 | 41 |
| Z4337 | NP_289562.1 | hypothetical protein | Not tested | OI-122 | Protein | 1e-86 | 41 |
| unnamed | AAC31494.1 | L0015 | Not tested | LEE | Protein | 1e-86 | 41 |
| Z5098 | NP_290249.1 | prophage-associated protein | Not tested | LEE | Protein | 1e-86 | 41 |
| unnamed | ACU09439.1 | IS66 family element transposase | Not tested | LEE | Protein | 6e-87 | 41 |
| ECs4547 | NP_312574.1 | hypothetical protein | Not tested | LEE | Protein | 8e-87 | 41 |
| tnp | AEA34686.1 | transposase | Not tested | Not named | Protein | 3e-86 | 41 |
| unnamed | AAL57570.1 | unknown | Not tested | LEE | Protein | 1e-86 | 41 |
| unnamed | CAI43806.1 | hypothetical protein | Not tested | LEE | Protein | 1e-86 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| USDA257_c20750 | YP_006397414.1 | hypothetical protein | VFG1700 | Protein | 5e-79 | 47 |
| USDA257_c20750 | YP_006397414.1 | hypothetical protein | VFG0793 | Protein | 6e-87 | 41 |
