|
Name : tktA (USDA257_c18580) Accession : YP_006397202.1 Strain : Sinorhizobium fredii USDA 257 Genome accession: NC_018000 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : - COG ID : - EC number : 2.2.1.1 Position : 1965478 - 1967505 bp Length : 2028 bp Strand : - Note : - DNA sequence : ATGTCTGTCTCATTGGTCGCCGAGAAGGCGAAAATCGATCCCGAGAATTTCGCGCTGGCCAACTGCATACGCGCTTTGGC TATCGATGCTGTCGAAGCGGCAAAGTCAGGTCACCCGGGTGCTCCCATGGGAATGGCCGATGCCGCAACGGTACTGTTCA GGAAACATCTGCGATTTGACGCCAGCGCTCCGGATTGGCCGAACAGAGACCGTTTCGTCCTGTCTAATGGCCACGCATCG ATGTTGCTCTACGGCCTGCTACATCTCACCGGCTATGAGGACATGACCATCGAGGAAATTCGCAACTTCCGTCAATGGGG ATCAATCACGGCGGGGCATCCAGAATATGGTCATGCCAAGGGCGTCGAAACGACAACCGGGCCACTGGGGCAGGGGATCG CGACGGCCGTCGGCATGGCGCTTGCCGAAAAGCGCTTGGCGGCCGAGTTTGGCGACGATCTGGTCAACCACCGCACCTAT GTCTTCGTAGGCGACGGCTGCCTTCAAGAGGGGATTGGTCAGGAGGCGATCTCGCTCGCCGGGCACCTTGGTCTCGGCAA GCTGATTGTCATCTACGACGATAATCAGATAACGATTGATGGACCTACCTCGGTTAGCTTCTCCGAAGATATTCCTGCTC GGTTCGCGGCATGTGGTTGGCATGTACAGTCCTGTGACGGTCATGACTCACACGCTCTTGATGCCGCGCTGCAGAAGGCA AAGGCGGAGACGAGCAAGCCGTCTCTGATTGCGGCAAAGACTGTGATCGGGTTCGGATCACCCAACAAGGCAGGAACTTA CGCTGTCCACGGTTCCCCACTTGGAAGCGCCGAAGCTGCGACGACGAAGGAAGTGATTGGTTGGCGCGAGGCTCCGTTCG AAATTCCGGAGAACCTCGCTAACCAGTGGAGAGCTGTCGGCCAACGCGGACGCGAAGAGCGCCAGGCATGGGAAGAACTG CTTCACTCAAAACCGCACGACCTCAAATCGGAGTTCACCCGGAGAGTGGAAGGAAAGCTGCCGCAGGGTTTTGACAGCGC GATCGAAAAGGCGCGAGCCGATCTCTTCGCCGAACCCAAGAAGGCTGCCACCCGCAAGGCCAGCCAGATGGCCTTGGAGG CGCTAGCCGGAAGCGTCCCTGAAATGATCGGCGGCTCGGCCGACTTGACCGGTTCGAACCTCACCCGCGTGAAGGCAGTT GATACACAATACACTCGCGAGGCGGCTGGTCGGTACATTGGCTACGGTGTCCGCGAGTTCGCGATGGCGGCGGCAATGAA CGGCCTTTGCGTTCATGGCGGACTTATTCCGTACGGCGGCACATTTTTGATGTTCTCCGATTACGCCCGCAATGCCATCC GTCTCTCTGCGCTGATGAAGCTCGGCGTCATCTACGTCATGACCCACGATTCCATCGGTCTTGGCGAAGATGGTCCAACT CACCAGCCGGTCGAACACCTGGCATCCTTGCGAGCTATCCCCGGCCTCAATGTTATGCGCCCGGCCGATACGGTGGAAAC GCTGGAGGCCTGGGAGATTGCGATCCGCATTCGCCACGTCCCTACGTTGCTCGCTCTCTCGCGCCAGGACGTGCCGCAGC TCAGACTGGACTCTTCCAACGAAAACCTCAGCGCAAAGGGCGCTTACGTCATTCGGCACTTTGGGAAAGGTCGCGACGTC ACAATCATCGCTACCGGCACTGAGGTCGCGCTTGCGGTTGAGGCTTCCGAGGAGCTGCATCGCCAAGGCTATTCGGTCGC TGTCGTGTCGATGCCATCCTGGCAACTCTTCGACCAGATGCCGCGAGCATACCAGGCCGAGGTTCTCGGTAGCGCGCCGC GCCTGGGCGTCGAGGCGGCAGGGAAGTTCGGATGGACGCGCTACGTCGCCTCCGAAGATGACGTCATCGGCATGTCTGGA TTTGGAGCCTCCGCTCCCGCGGAACGGCTCTACGCCGAGTTCGGAATTACCAAAGATGCCATCGTGGCGAGGGCAAAGGC CGTTATGGCCAGCAAGGAGAATATCTAA Protein sequence : MSVSLVAEKAKIDPENFALANCIRALAIDAVEAAKSGHPGAPMGMADAATVLFRKHLRFDASAPDWPNRDRFVLSNGHAS MLLYGLLHLTGYEDMTIEEIRNFRQWGSITAGHPEYGHAKGVETTTGPLGQGIATAVGMALAEKRLAAEFGDDLVNHRTY VFVGDGCLQEGIGQEAISLAGHLGLGKLIVIYDDNQITIDGPTSVSFSEDIPARFAACGWHVQSCDGHDSHALDAALQKA KAETSKPSLIAAKTVIGFGSPNKAGTYAVHGSPLGSAEAATTKEVIGWREAPFEIPENLANQWRAVGQRGREERQAWEEL LHSKPHDLKSEFTRRVEGKLPQGFDSAIEKARADLFAEPKKAATRKASQMALEALAGSVPEMIGGSADLTGSNLTRVKAV DTQYTREAAGRYIGYGVREFAMAAAMNGLCVHGGLIPYGGTFLMFSDYARNAIRLSALMKLGVIYVMTHDSIGLGEDGPT HQPVEHLASLRAIPGLNVMRPADTVETLEAWEIAIRIRHVPTLLALSRQDVPQLRLDSSNENLSAKGAYVIRHFGKGRDV TIIATGTEVALAVEASEELHRQGYSVAVVSMPSWQLFDQMPRAYQAEVLGSAPRLGVEAAGKFGWTRYVASEDDVIGMSG FGASAPAERLYAEFGITKDAIVARAKAVMASKENI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 7e-150 | 52 |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 3e-149 | 51 |
