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Name : gabD4 (USDA257_c17560) Accession : YP_006397101.1 Strain : Sinorhizobium fredii USDA 257 Genome accession: NC_018000 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase [NADP+] GabD Function : - COG functional category : - COG ID : - EC number : 1.2.1.79 Position : 1852691 - 1854169 bp Length : 1479 bp Strand : + Note : - DNA sequence : ATGGCTATTTCGGAAAAACTCCTCTCCAAGCTCAAAGACCCATCGCTGGTCAGCGACAAGGCCCTTATCGCCGGCGAATG GGTGGCCACGAGCGACAGCGGCAAGACCTTCGAGGTCACCAACCCGGCAGATGGCGATGTGATCGCCACGCTTCCCGACA TGAACCGCGCCGAAACGGCGCGCGCGATCGAAGTCGCCTACAAGGCGCAGAAGGCCTGGGCCAAGAAGACCGGCAAGGAG CGTGCGGCCGTGCTCCGCAAGCTCTATGACCTGATGGTGGCGAATGCCGACGATCTCGCCGCAATCCTGACTATGGAAAT GGGCAAGCCGCTTGCGGAGGCCAAGGGTGAAATCCTCTATGGCGCCGCCTATCTCGAATGGTTCGGCGAAGAGGCCAAGC GCGTCTATGGCGACACGATTCCCGGCCACCAGCCGGACAAGCGGATCATCGTCATCAAGCAGCCGGTCGGCGTCGTTGCT GCCATCACGCCGTGGAACTTTCCGAACGCGATGCTCGCGCGCAAATTCGCGCCGGCCGTCGCCGCGGGCTGCGCCATGGT GTCGAAGCCGGCCGCTGAGACGCCGCTTTCGGCCCTGTCGCTGGGTTTGCTCGCTGAGCGCGCCGGCCTTCCGGCCGGGA TTTTTAATGTCATCACCTCGGAGGATTCACCGTCGGTCGGCAAGGAATTCACCGAGAACGACAAGGTCCGCAAGTTGACT TTCACCGGCTCGACCGGTGTCGGCAAGATCCTGATGCGCCAAGGTGCCGAGCAGATCATGAAGCTCGGCCTCGAACTCGG CGGCAATGCGCCCTTCATCGTGTTCGACGATGCGGATCTCGATGCTGCGGTCGAAGGCGCCATGGTCTCGAAATATCGGA ACAACGGGCAGACCTGCGTCTGCGCCAACCGCCTCTACGTCCAGACCGGCGTCTATTATACCTTCGCCAAAAAGCTGGTC GAGAGAGTCGCGGCGATGAAGGTGGGCGACGGTTTCGAACCTGGCGTGAATGCCGGCCCGCTGATCACCGAGAAAGCTGT CGAAAAGGTCGAGGAACATATCGCCGACGCGCTCGAAAAGGGCGCCAAGGTGGCTGTCGGCGGCAAACCGGACGCCCGTG GCGGCCTCTTCTTCCAGCCGACCATACTCACCGGGGTGACCACGCAGATGAAGATTGCGCGCGAGGAGACCTTTGGTCCG GTCGCGCCGCTCTTCAAGTTCGAGACCGAGGAGCAGGTGATCGAAATGGCCAACAACACCGACTTCGGCCTCGCCTCCTA TTTCTACTCGAGGGATGTGTCGAAGATCTTCCGCGTAGCGGAAGAACTCGAATATGGCATGGTCGGTATCAATACCGGCC TGATCTCCACGGAAGTGGCGCCGTTCGGCGGCATCAAGCAGTCCGGCCAGGGCCGCGAAGGCTCGAAATACGGCATAGAG GATTATATCGAGATCAAGTATCTCTGCTTGAGTGTTTGA Protein sequence : MAISEKLLSKLKDPSLVSDKALIAGEWVATSDSGKTFEVTNPADGDVIATLPDMNRAETARAIEVAYKAQKAWAKKTGKE RAAVLRKLYDLMVANADDLAAILTMEMGKPLAEAKGEILYGAAYLEWFGEEAKRVYGDTIPGHQPDKRIIVIKQPVGVVA AITPWNFPNAMLARKFAPAVAAGCAMVSKPAAETPLSALSLGLLAERAGLPAGIFNVITSEDSPSVGKEFTENDKVRKLT FTGSTGVGKILMRQGAEQIMKLGLELGGNAPFIVFDDADLDAAVEGAMVSKYRNNGQTCVCANRLYVQTGVYYTFAKKLV ERVAAMKVGDGFEPGVNAGPLITEKAVEKVEEHIADALEKGAKVAVGGKPDARGGLFFQPTILTGVTTQMKIAREETFGP VAPLFKFETEEQVIEMANNTDFGLASYFYSRDVSKIFRVAEELEYGMVGINTGLISTEVAPFGGIKQSGQGREGSKYGIE DYIEIKYLCLSV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 3e-147 | 60 |
