Gene Information

Name : USDA257_c17400 (USDA257_c17400)
Accession : YP_006397085.1
Strain : Sinorhizobium fredii USDA 257
Genome accession: NC_018000
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1833996 - 1835627 bp
Length : 1632 bp
Strand : +
Note : -

DNA sequence : 
ATGGAAAACGGCCCTGATTTGCTTCCCGACGATGTTGCTGCCCTGCGGGCAGAGCTCATCGCGGCACGCGCCAAGGGCGC
CCAGATCGAGGCTGAACTTGCCGTTGCCAAGGCCAAGGCGTCGGAGGATCTTGCCGTCATTGCCCGGCAGAAGTTGCGCA
TCGAAAAGCTCGAGCGGCAGCTCTATGGCCCGAAGGGGGAGCGTCGCGCCCGGCTGATCGATCAGATGGAGTTCCAACTG
GCAGAGTTGGAGATGGCGGCGACCGAGGACGAACTCGCTGCCGACATGGCGGTGGCGGCCACCGTCAATGTCGGCGGCTT
TACCCGCAGCCGGCCGGTGAAGAAGCCTTTCCCCGATCATCTTCCGCGCGAACGCGTCGTCGTGCCCGGTCGCGGTGACC
GACTGCGCAAGTTGGGTGAGGACATCACCGAGACCCTCGAGGTCGTTCCGCGCCAATGGAAAGTGATCCAGACGGTGCGC
GAGAAGTTCACCTGCCGCGATTGCGAGAAGATCAGCCAGACTCCGGCCCCTTTCCATGCCATCCCGCGCGGATGGGCCGG
CCCCAATCTTCTGGCGATGATCCTGTTCGACAAGTTCGGCCAGCATCTGCCGCTCAATCGTCAGGTCGAGCGCTTCGAAC
GCGAAGGCGTTTCCCTCAGCCTGTCGACGGTGGCCGATAGCATCGGCGCTTGCTGTGCCGTACTCGATCCGATCATCAAA
CGGATCGAAGCCCACACGTTTGCGGCAGAGCGGTTGCACGGCGACGACACGACGGTCCCGGTCCTTGCCGCAGGGAAGAC
CGATACCGCCCGAAGTTGGGTCTATGTCCGCGACGATCGACCGTTCGGCGGCACGGCCGCACCGTCGGCGATGTTCTACT
ATTCCCGTGATCGCGCGGGCGAGCACCCGCAGGCGCATCTCGCCGGCTATGGCGGCATTCTGCAGGCGGACGCCTATGGC
GGCTATACCAAGCTCTATCTTCCGGATCGAAGGCCCGGCCCGATAACGGAAGCAGCCTGCTGGGTCCATGCGAGGCGGCC
CTTTTTTGCGATGGCCGACGCCGAGGCGAATGCGCGCCGAAGAGCGCAGGGCAAGAAGGCGCTCGTCATATCGCCGATCG
CGCTGGAAATGGTGCAACGGATCGATGCCCTGTTCGACATCGAGCGCGAGATCAACGGTCAGAGCGCGGAAGTCCGAAAG
GCCGCTCGTCAGGATTGGAGCCTGCCTCTGGTTCTCGTCCTGGAAGCGTGGATGAAGGGTCAGCGTGCCAAGCTGTCTCG
CAACGATGATCTCGCCAAGGCCTTCGATTACCTGCTGAAACGCTGGCCTGCCTTCACCCTCTTCCTCGACGACGGGCGTG
TCTGTCTCTCGAACAATGCCGCCGAACGCGCCCTGCGCGGCATAGCGCTGGGCAGGAAATCCTGGTTATTCGCTGGATCG
GATCGCGGCGGCCAACGCGCCGCCGCCATGTACAGCTTGATTGTCACGGCCAAAATGAATGACGTCGATCCGCAAGCCTG
GCTCGCCGACGTGCTTCACCGCATTGCCGGTTATCCCGCGCATCGGATCGATGAGCTCTTGCCCTGGAATTGGCAGAGCG
CGTCGCCGGCGGCGCACAAGCTGGCGGCCTGA

Protein sequence : 
MENGPDLLPDDVAALRAELIAARAKGAQIEAELAVAKAKASEDLAVIARQKLRIEKLERQLYGPKGERRARLIDQMEFQL
AELEMAATEDELAADMAVAATVNVGGFTRSRPVKKPFPDHLPRERVVVPGRGDRLRKLGEDITETLEVVPRQWKVIQTVR
EKFTCRDCEKISQTPAPFHAIPRGWAGPNLLAMILFDKFGQHLPLNRQVERFEREGVSLSLSTVADSIGACCAVLDPIIK
RIEAHTFAAERLHGDDTTVPVLAAGKTDTARSWVYVRDDRPFGGTAAPSAMFYYSRDRAGEHPQAHLAGYGGILQADAYG
GYTKLYLPDRRPGPITEAACWVHARRPFFAMADAEANARRRAQGKKALVISPIALEMVQRIDALFDIEREINGQSAEVRK
AARQDWSLPLVLVLEAWMKGQRAKLSRNDDLAKAFDYLLKRWPAFTLFLDDGRVCLSNNAAERALRGIALGRKSWLFAGS
DRGGQRAAAMYSLIVTAKMNDVDPQAWLADVLHRIAGYPAHRIDELLPWNWQSASPAAHKLAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 2e-87 45
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 7e-90 44
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 5e-89 44
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 5e-89 44
unnamed AAC31494.1 L0015 Not tested LEE Protein 7e-90 44
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 9e-90 44
tnp AEA34686.1 transposase Not tested Not named Protein 7e-90 44
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 9e-90 44
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 3e-90 44
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 4e-90 44
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 2e-89 44
unnamed AAL57570.1 unknown Not tested LEE Protein 7e-90 44
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 2e-82 43
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 2e-86 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
USDA257_c17400 YP_006397085.1 hypothetical protein VFG0793 Protein 4e-90 44