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Name : USDA257_c11770 (USDA257_c11770) Accession : YP_006396525.1 Strain : Sinorhizobium fredii USDA 257 Genome accession: NC_018000 Putative virulence/resistance : Unknown Product : transposase IS4 family protein Function : - COG functional category : - COG ID : - EC number : - Position : 1239075 - 1240541 bp Length : 1467 bp Strand : + Note : - DNA sequence : ATGATAGTCTACCTCCAGTTGAGCGGGGGATTCGGCATGGCGGGTTTCATCGAGGGTAAGGATCGGCGAGAGCAGCTGTT CTTGCCGGAATGCCTCGATGATTATGTCACCGAAGACAACCCGGCCCGCGTTGTCGATGTCTTCATCGATGAGCTGGATT TGCGTGCAATGGGCTTTGCCGCCGCGGCGGCGACTGGGCGGCCGGGATATAGCCCGGCAACCATGCTGAAGCTCTACCTC TATGGCTACCTCAACCAAGTGCAGTCGAGCCGGCGGCTGGAGCGGGAGGCGGGCCGCAACGTCGAACTGATGTGGCTGAT GGGTAAGCTCGCGCCCGACTTCAAAACGATCGCCGATTTCCGGCGTGACAACGGCGAAGCGATCCGTGCGGTCTGCCGCC AATTCGTGCTTCTGTGCCGCAAGATCGGCCTCATCGCGGGTGGCACGGTTGCGGTCGACGGCAGCCGATTCAAGGCGGTG AACACACGCGACAAAAACTTCACGCCTGGCGCGATCCGCCGACGTATGGAGCAGGTGGATGCCAGCATTGAGCGGTATCT GGGCATGCTCGACACGGCCGACCGGCAGGAGGATGACGTCGCACAGATGCGGGTCAGCCGGCTGAAGGAACGGCTGGACT CGCTGCGGCGGCAGATGCGCGAGTTGCAGGCGATGGAGCAAGCGGTCCAAGACGCGCCGGACCGCCAGATCTCACTGACC GATTCCGATGCGCGGGCCATGGCAACGAGCGGCAAAGGCACCGGCATGGTCGGCTACAACGTGCAAGCGGCGGTCGACGC CGAGCACCATCTGATCGTCGCGCATGAGGTCACCAATGTCGGCCACGACCGGTCCCAACTTGCCAACATGGCTCAGCAGG CCAAGGAAGCGACCGGCGTCGAGGAACTGACAGTCCTGGCCGATCGCGGCTACTTCTCCGGTGAGGAAATCGTTGCCTGC GAGGCAGTTGGAGCGACGCCGATCGTGCCCCGACCGTTAACATCCGGGGCGAAGGCGGACGGTCGTTTCGACAAGCAGGA CTTCATCTATCAGCCAGAGACCGACAGCTATCGCTGCCCGGCAGGCGAACAACTGATCTGGCGCTTCACCGCGGTGGAGA AGGGTCTGATCCTCAGCCGTTACTGGTCGAGCAACTGCGGCAGCTGCGCCATCAAGGCAAAATGCACGCCGAGCAAACAG CGGCGCATCACCCGCTGGGAGCATGAGGCAGTCCTGGAGAAGATGCAGCGCAGGCTGGACGAGATGCCGGACGCGATGCG GATCAGGCGCAGCACCGTCGAGCACGTATTTGGCAGCCTCAAAGACTGGATGGGAAGAGACCACTTCCGGATGCGAAGGC TACGAAATGTCGGAACGGAAATGAGCCTCCACGTCCTCGCCTACAACATCAAGCGAGCCATCGCCGTCCTCGGCGCTCCC GCGTTGATGGGTGCAATGAGAGGGTGA Protein sequence : MIVYLQLSGGFGMAGFIEGKDRREQLFLPECLDDYVTEDNPARVVDVFIDELDLRAMGFAAAAATGRPGYSPATMLKLYL YGYLNQVQSSRRLEREAGRNVELMWLMGKLAPDFKTIADFRRDNGEAIRAVCRQFVLLCRKIGLIAGGTVAVDGSRFKAV NTRDKNFTPGAIRRRMEQVDASIERYLGMLDTADRQEDDVAQMRVSRLKERLDSLRRQMRELQAMEQAVQDAPDRQISLT DSDARAMATSGKGTGMVGYNVQAAVDAEHHLIVAHEVTNVGHDRSQLANMAQQAKEATGVEELTVLADRGYFSGEEIVAC EAVGATPIVPRPLTSGAKADGRFDKQDFIYQPETDSYRCPAGEQLIWRFTAVEKGLILSRYWSSNCGSCAIKAKCTPSKQ RRITRWEHEAVLEKMQRRLDEMPDAMRIRRSTVEHVFGSLKDWMGRDHFRMRRLRNVGTEMSLHVLAYNIKRAIAVLGAP ALMGAMRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF SG74 | AAN62296.1 | transposase domain protein | Not tested | PAGI-3(SG) | Protein | 2e-159 | 63 |
| tnpA | ACY75519.1 | transposase | Not tested | Tn6060 | Protein | 2e-160 | 63 |
| tnpA | ACY75536.1 | transposase | Not tested | Tn6060 | Protein | 2e-160 | 63 |
| unnamed | CAD91340.1 | hypothetical protein | Not tested | Not named | Protein | 2e-160 | 63 |
