Gene Information

Name : tetR1 (USDA257_c11270)
Accession : YP_006396475.1
Strain : Sinorhizobium fredii USDA 257
Genome accession: NC_018000
Putative virulence/resistance : Unknown
Product : regulatory protein TetR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1192651 - 1193250 bp
Length : 600 bp
Strand : +
Note : -

DNA sequence :
ATGCCCGAGAAGGCGCCTGCAAGGGAACGCCTGCTGAACGCCGCAGCCGAATTGTTCTACCGCGATGGGGTTGGAGCGAC
AGGTATCGACACGATTACCGCGCATGCAGGCGTCGCGAAGATGAGCTTGTACAACAACTTCGCGTCCAAGACCGATCTGG
TAAATGCCTACCTCCAGGCACGCCATGTCGAATGGCGGGAACTGTATCGAGAGCGCCTCAAGCATGCAAAGACACCTCGA
GAGCGCGTTCTGGCGGTGTTCGATTCCTATGTTGACCACGCGGACTTGGCCTATCGGTGGGGGTTCCGCGGATGCGGGCT
TCTCAACGCCGCCGCCGAACTCCCGGTCGGCGATCCCGGCCGAGCAACAGTCGCCATGCAGAAGGACGAGGCGGAGCGGC
TCTTCAAGCAATATCTATCGGAAATGCACCCCACAGCGGGTGGGGTGATCGCCGAGACAGCGGAACATCTGTCGTTTTTG
CTCGAGGGGGCAATGGCTCGGGCAGGCCTCGACGGACATGACGGCAGACTGAAGACAGCGCGCAAGATCGCCATCTCCGT
CATGGATCAGCTATCGACCCTCCAGAACCCCGACGCCTGA

Protein sequence :
MPEKAPARERLLNAAAELFYRDGVGATGIDTITAHAGVAKMSLYNNFASKTDLVNAYLQARHVEWRELYRERLKHAKTPR
ERVLAVFDSYVDHADLAYRWGFRGCGLLNAAAELPVGDPGRATVAMQKDEAERLFKQYLSEMHPTAGGVIAETAEHLSFL
LEGAMARAGLDGHDGRLKTARKIAISVMDQLSTLQNPDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00319 YP_008207784.1 Transcriptional regulator Not tested AbaR25 Protein 3e-42 54
BJAB0868_00323 YP_008211649.1 Transcriptional regulator Not tested AbaR26 Protein 3e-42 54