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Name : gabD2 (USDA257_c10560) Accession : YP_006396404.1 Strain : Sinorhizobium fredii USDA 257 Genome accession: NC_018000 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase [NADP+] Function : - COG functional category : - COG ID : - EC number : 1.2.1.79 Position : 1107802 - 1109277 bp Length : 1476 bp Strand : - Note : - DNA sequence : ATGGCCCTGACATCCGCATTGACGAAACACCTTCGCGCAGCGGACCAGTTCGCCCGCCTCGATCGTGTCACTCGTTCCTC CGGGAAGTGGGAAGGCCCGTCTTTCGACGTCTTCAATCCTTCGACCGGTGAATTGCTGGCGACGCTTCCTGACATGGGGG TCGAAGACGCGCAGGTCGCGATCGATGCGGCCGCAACGGCCCAGCCAATCTGGGCAGGAAAGCCCGCCAAGGATCGAAGC GCGATCCTGCGCCGCTGGCACGACCTGATCGTCGAGCATGTCGACGATCTCGCCGCCATTCTGACGGCGGAGATGGGCAA GCCGCTCGGCGAGGCGATGGGCGAGGTCCTGCATGCAGCCTCCTATATCGAGTGGTACGCCGAAGAGGCGAAACGCGTCT ATGGCGAGACGTTCCCGGCTCCTGCCAATGACCGCCGCATGCTCGTCATCAAGCAGCCGGTCGGCGTGGTTGGTACCATC ACGCCCTGGAATTTCCCTGCTTCGATGGTCGCCCGCAAGATTTCGCCGGCGCTCGCCGCCGGCTGCGCCATTGTCCTGAA GCCTGCGGAACAGACGCCGCTGGTCGCCGGTGCGATGTTCGTGCTTGCCGAAAAGGCCGGCTTCCCCGAGGGCGTCCTTA ATCTGCTCTACGCGTCCGAGGGCGCGCCGATCGGGCGCGAACTCTGCAGCAACCCCAAGGTCCGCAAGATCAGCTTCACC GGCTCGACCGAAGTCGGCCGGCTGTTGATGCGGCAATGCTCCGACCAGATCAAGAAGGTTAGCCTCGAACTCGGCGGCAA TGCCCCCTTCATCGTCTTTGACGATGCGGACATTGGCGAGGCGGTGGACGGCGCGATCCAGGCGAAGTTCCGCAACGCCG GCCAGACCTGCGTCTCGGCAAACCGCATCTATGTGCAATCGGCGGTGCACGACGTCTTCGCGGAGAAATTCGTCGCGCGG GTGCGCGAACTTCGCGTCGGGGACGGATTTTCCGCCGGCGCCACCATCGGCCCGATGATCGACGGCCACGCGATCGAGAA GATCGAAGCGCATGTCGCCGACGCGCTCGCCAAGGGCGCCGAACTTCGCTGCGGCGGCGAGCGGATCGGCACGAACGGTA CGTTCTTCGAGCCGACCGTTCTCACCGGCATTTCGCACGACATGCGCGTCGCCCAGGAGGAGACGTTCGGGCCGATCGCC CCGATCATCCGCTTCGAGACCGCCGAACAGGTAGTGACCGAGGCGAATGACACGATCTACGGCCTCGCCGCTTATTTTTA TGCCGAGAATCTGAAGCGGGTCTGGCATGTGGCCGAGGCGTTGGAATACGGCATGGTCGGCATCAATACCGGCCGCATGT CCTCAGAGGCAGCCCCCTTCGGCGGCATCAAGCAGTCCGGCATCGGCCGCGAGGGATCGCGCCACGGTCTCGAGGACTAT CTCGAGATGAAATATCTCTGCATGGGCAACATCTGA Protein sequence : MALTSALTKHLRAADQFARLDRVTRSSGKWEGPSFDVFNPSTGELLATLPDMGVEDAQVAIDAAATAQPIWAGKPAKDRS AILRRWHDLIVEHVDDLAAILTAEMGKPLGEAMGEVLHAASYIEWYAEEAKRVYGETFPAPANDRRMLVIKQPVGVVGTI TPWNFPASMVARKISPALAAGCAIVLKPAEQTPLVAGAMFVLAEKAGFPEGVLNLLYASEGAPIGRELCSNPKVRKISFT GSTEVGRLLMRQCSDQIKKVSLELGGNAPFIVFDDADIGEAVDGAIQAKFRNAGQTCVSANRIYVQSAVHDVFAEKFVAR VRELRVGDGFSAGATIGPMIDGHAIEKIEAHVADALAKGAELRCGGERIGTNGTFFEPTVLTGISHDMRVAQEETFGPIA PIIRFETAEQVVTEANDTIYGLAAYFYAENLKRVWHVAEALEYGMVGINTGRMSSEAAPFGGIKQSGIGREGSRHGLEDY LEMKYLCMGNI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 2e-120 | 54 |
