Gene Information

Name : pdxS (BBB_0354)
Accession : YP_006393829.1
Strain : Bifidobacterium bifidum BGN4
Genome accession: NC_017999
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 425085 - 425960 bp
Length : 876 bp
Strand : +
Note : COG0214:Pyridoxine biosynthesis enzyme

DNA sequence :
ATGGCTGAAAACCGAGCGGAACTGAACAAGAACCTGGCGCAGATGCTCAAGGGCGGCGTGATCATGGACGTGACGACTCC
CGAGCAGGCTCGGGTCGCCGAGGACGCCGGCGCGTGCGCGGTCATGGCGTTGGAGCGCATCCCCGCTGATATCCGTGCCG
CCGGCGGCGTCTCGCGTATGAGCGACCCGGCCATGATCAAGGGCATTCAGGAGGCCGTCTCCATTCCGGTCATGGCGAAG
GTGCGCATCGGGCACATCGCTGAAGCCCGCATCCTGCAGGCCATCGACATCGACTACATCGACGAGTCCGAAGTGCTTTC
GCCGGCCGATGACGTCTATCACATCGACAAGACACAGTTCGACGTGCCGTTCGTGTGCGGTGCGAAGAACCTGGGTGAGG
CGCTGCGCCGCATCGCCGAGGGGGCCGCGATGATTCGCACCAAGGGCGAGCCCGGCACCGGTGACGTGATCCAGGCCGTG
CGTCACATGCGCACGATGAACAAGCAGATTCGCGAGCTCGTCGGCCTGCGTGACGACGAGGTGTTCGAGGCCGCCAAGCA
GCTGGCCGTGCCGGTCGAGCTGGCGCGTTACGTGCACGACAACGGCCGACTGCCGGTCGTGAACTTCGCCGCCGGTGGCG
TGGCCACCCCGGCCGACGCGGCGCTGATGATGGAGCTCGGTGCCGAAGGCGTGTTCGTCGGTTCCGGCATCTTCAAGTCC
GGCGACCCGGCCAAGCGCGCCGCCGCCATCGTCAAGGCCACCGCCAACTGGCAGGACGCCGATCTGCTGGCACGACTCTC
CGAGAACCTCGGCGAGGCCATGGTCGGCATCAACGAGGACGAAATCCAGACCATCATGGCCGCCCGCGGCGAGTGA

Protein sequence :
MAENRAELNKNLAQMLKGGVIMDVTTPEQARVAEDAGACAVMALERIPADIRAAGGVSRMSDPAMIKGIQEAVSIPVMAK
VRIGHIAEARILQAIDIDYIDESEVLSPADDVYHIDKTQFDVPFVCGAKNLGEALRRIAEGAAMIRTKGEPGTGDVIQAV
RHMRTMNKQIRELVGLRDDEVFEAAKQLAVPVELARYVHDNGRLPVVNFAAGGVATPADAALMMELGAEGVFVGSGIFKS
GDPAKRAAAIVKATANWQDADLLARLSENLGEAMVGINEDEIQTIMAARGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 2e-75 68
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 2e-75 68
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 2e-75 67