Gene Information

Name : sgbU (BBB_0346)
Accession : YP_006393821.1
Strain : Bifidobacterium bifidum BGN4
Genome accession: NC_017999
Putative virulence/resistance : Unknown
Product : putative hexulose-6-phosphate isomerase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 416569 - 417459 bp
Length : 891 bp
Strand : +
Note : COG3623:Putative L-xylulose-5-phosphate3-epimerase

DNA sequence :
ATGGTCACCAACGCGCTGGGAATATATGAAAAGGCGCTGCCGCGCGGCCTGAGCTGGGAGCAGACGTTCGATCTGGTGCA
TGAGCTGGGATACAACTTCCTTGAATTCTCGGTCGACGAAAGCGACGAGCGACTGGCCCGTCTCGACTGGACCGAGCACG
ACCGGGCACGGTTCCGCGACGCCATGTGGCGCACCCACAGCCGCATCAACACCATGATGCTCTCCGGTCACAGGCGGTTC
CCGCTCGGGTCAAAAGACCCCGAGGTGCGCGAGAAGGCGCTCGACATGATGCGCAAGGCGATCGACCTCGCCGTCGATCT
GGGCATCCGCAACATCCAGCTCGCCGGATACGACGTGTATTACGAGCCGAAAACCCTGCTGTCTCGCGAATACTTCGTCG
AGAACCTGCGCAAATGCGTCGACATGGCCGCGAAGAAACTGGTGATGCTTTCCATCGAGACGATGGACGACCCGTTCATC
AACTCGCTGGACAAGGTCACCTATTACAAGTCGCAAGTGCGCAGTCCATGGCTGCAGGCGTACCCGGATGTGGGCAACCT
CACGGCTTGGCCCACCAACGATGTGGGGCGCGAGATCGAATCCAACATCGACAACATCGTCGCCGTGCACCTCAAGGACA
CCAAGCCGGTGGGTGAGACCTCGAAAGGCGTGTTCAAACGGGTGCCTTTCGGTGAGGGGACGGTCGACTTCGAAGCGTGC
CTGCGTATCTTCAAACGACTGGGATACCAGGGCAGCTACACGGTCGAGATGTGGACCGATGAGTCGCCGGATCCGGTGGC
CGAGGTGACTCGGGCCAAAAAGATGTTCGACGGGCTGTTCGACGTGGTGGGCATCGAACAGGAGCCGATCGCCGGCATCG
GAGAATACTGA

Protein sequence :
MVTNALGIYEKALPRGLSWEQTFDLVHELGYNFLEFSVDESDERLARLDWTEHDRARFRDAMWRTHSRINTMMLSGHRRF
PLGSKDPEVREKALDMMRKAIDLAVDLGIRNIQLAGYDVYYEPKTLLSREYFVENLRKCVDMAAKKLVMLSIETMDDPFI
NSLDKVTYYKSQVRSPWLQAYPDVGNLTAWPTNDVGREIESNIDNIVAVHLKDTKPVGETSKGVFKRVPFGEGTVDFEAC
LRIFKRLGYQGSYTVEMWTDESPDPVAEVTRAKKMFDGLFDVVGIEQEPIAGIGEY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
M5005_Spy_0152 YP_281516.1 L-xylulose 5-phosphate 3-epimerase Not tested Not named Protein 1e-55 48