Gene Information

Name : rph (BBB_0330)
Accession : YP_006393805.1
Strain : Bifidobacterium bifidum BGN4
Genome accession: NC_017999
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.7.56
Position : 394971 - 395735 bp
Length : 765 bp
Strand : +
Note : COG0689:RNase PH

DNA sequence :
ATGGCTGAAATCAAAGACATGTTGGACAAGGCAATGGTGATTCGCGCGGACGGCCGCGTAGTGGACGAACTGCGCCCGGT
GCGCATCACGCGGCACTTCACGGACGTGCCCGAAGGATCGGTACTCATCGAATGCGGCAACACGCGCGTGATGTGCACGG
CGACGTTCACGCCGTCGGTGCCGCGCTGGCGCAAGGATTCCGGACTCGGCTGGGTGACCGCCGAATATTCGATGCTGCCG
CGAGCCACCGCCGAGCGCACCGACCGCGAGTCAGTGCGCGGCAAGGTCGGCGGCCGCACCCATGAGATCAGCCGTCTGAT
CGGCCGCTGCCTGCGCGGCGTCGTCGACATGAAGGCGCTTGGCGAGAACCAGATCCAGATCGACTGCGATGTGCTGCAGG
CTGATGGCGGCACCCGCACCGCCTCGATCACCGGCGCGTATGTGGCGCTGGTCGACGCGATGCGCTGGGCTGAGCAGAAG
CGCCACATTCGTTCGGCCGACCGCGTGCTCAAAGACGCCGTTTCCGCGGTGTCGGTCGGCGTTATCAACGGCACGCCGAT
GCTTGACCTGCCCTACATCGAGGACAGTCAGGCGATGACCGACATGAACGTGGCGATGACCGGATCCGGTGACTTCATCG
AGATCCAGGGCACCGCCGAACACCGCCCGTTCAACCGCGCCGAACTCAACACATTGCTCGACCTCGCCGAAAAGGGCAAC
AAGGAGCTTCAGGCCGCCCAGCGTGCCGCCCTCTCGCTCGATTGA

Protein sequence :
MAEIKDMLDKAMVIRADGRVVDELRPVRITRHFTDVPEGSVLIECGNTRVMCTATFTPSVPRWRKDSGLGWVTAEYSMLP
RATAERTDRESVRGKVGGRTHEISRLIGRCLRGVVDMKALGENQIQIDCDVLQADGGTRTASITGAYVALVDAMRWAEQK
RHIRSADRVLKDAVSAVSVGVINGTPMLDLPYIEDSQAMTDMNVAMTGSGDFIEIQGTAEHRPFNRAELNTLLDLAEKGN
KELQAAQRAALSLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 7e-66 62