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Name : clpB (BBB_0270) Accession : YP_006393745.1 Strain : Bifidobacterium bifidum BGN4 Genome accession: NC_017999 Putative virulence/resistance : Virulence Product : ATP-dependent chaperone Function : - COG functional category : - COG ID : - EC number : - Position : 332307 - 334970 bp Length : 2664 bp Strand : + Note : COG0542:ATPases with chaperone activity, ATP-binding subunit DNA sequence : ATGGAACAGAAGTTCACCACCATGGCCCAGGAAGTCATCGGTGATGCGATTCAGAGCGCGTCTGCCGCGGGCAACGCGCA GGTCGAGACACTGCACGTGATGGATGCGCTGCTGCGTCAGGAAAACGGCGTGATTCAGGGGCTGATTCAGGCGGCGGGCG GCAGCCCGCAGGCGATTGGCGCCGCGGTGCGCAATGCTCTGGTCAAGATGCCGGCGGCGAGCGGGTCCACCACATCGCAG CCGCAGGCGAGCCGCCAGCTGACGGCGGCGCTGGCACAGGCCGAGAAGGAGATGCAGCAGATGGGCGACGAGTACGTCTC CACCGAGCACCTGCTCATCGGCATCGCCGCATCCGCACCGAACCAGAGCGCGGACATCCTCAAAGCGAACGGCGTGACGG CCGCGGCGCTGCGCAAGGCCGTCCCCGGCGTGCGCGGCGGCGCCAAGGTCACCAGCCCGGACGCTGAGGGCAGCTACAAG GCGTTGGAGAAGTACTCCACCGATCTGACCGCCCGCGCCAAGGAGGGTAAGCTCGACCCGGTGATCGGGCGTGATCAGGA GATCCGCCGTGTGATCCAGATCCTGAGCCGCCGCACCAAGAACAACCCGGTGCTGATCGGCGAGCCCGGCGTCGGCAAGA CCGCCGTCGTGGAGGGCCTCGCCCAGCGTATCGTGGCCGGCGATGTGCCGACCACGCTGCAGAACAAGAAGCTCATCAGC CTCGATTTGGGGTCGATGGTTGCCGGCTCGAAGTACCGTGGCGAGTTCGAGGAGCGCCTCAAGAGCGTGCTCAACGAAAT CAAGAACGCCGACGGCCAGATCATCACGTTCATCGACGAGATTCATACGATCGTCGGCGCTGGCGCGGCCGAAGGCTCGA TGGATGCCGGCAACATGCTCAAGCCCATGCTGGCGCGCGGTGAGCTTCGCCTGATCGGCGCGACCACGCTGGACGAGTAC CGTGAGAACATCGAGAAGGACCCGGCGCTTGAGCGTCGTTTCCAGCAGGTGTTCGTGGGCGAGCCGAGCGTGGAGGACAC GATCGCGATTCTGCGTGGCCTGAAGCAGCGTTACGAGGCGCACCACAAGGTGACGATCGGCGACGACGCGCTGGTCGCCG CCGCGACGCTCTCGAACCGCTATATTTCCGGCCGTCAGCTGCCCGACAAGGCCATCGATCTGGTCGATGAGGCGGCCGCG CACCTGCGCATGGAGCTCGACTCCTCCCCGGAGGAGATCGACGAACTGCAGCGCAAGGTCACGCGCTACGAGATGGAGGA GATGCAGCTCAAGAAGGCCGAGGATCCGGCCAGCAAGGAGCGCTTGGAGAAGCTGCAGAACGAGCTCGCGAACACTCGCG AGAAGCTGAGCGGCCTCAAGGCCCGCTGGGATGCGGAGAAGGCCGGCCACAACAAGGTCGGCGACCTGCGCGCCCAGCTG GACGCCAAGCGCGTCGAGGCTGACAAGTTCACCCGTGAGGGCAACCTGGCCGAGGCGTCGAAGATCCTGTACGGCGAGAT TCCGGCGATTCAGAAGCAGCTGGACGCGGCCGAGAAGGCCGATGCGGAAGACGGCGCGACGGGCGAGACCAAGCCCGAGC CGATGGTGCCCGACCATGTGGACGCCGATTCGGTGGCCGGCATCGTCTCCGAGTGGACCGGCATCCCCGTCGGTCGCCTG ATGCAGGGCGAGAACGAGAAGCTGCTGAGCATGGAGGACTATCTCGGCAAGCGCGTGATCGGCCAGAAGGAAGCGATCGC GGCGGTGAGCGACGCGGTGCGTCGTTCGCGCGCCGGCATCAGCGACCCGAACCGTCCGACCGGCTCGTTCCTGTTCCTCG GCCCCACCGGCGTGGGCAAGACCGAGCTCGCCAAGGCGCTCGCCGACTTCCTGTTCGACGACGAGAAGGCCATGGTCCGC ATCGATATGTCGGAGTACATGGAGAAGGCGTCTGTGAGCCGTCTGATCGGCGCCGCGCCCGGCTACATCGGCTATGAGGA AGGCGGCCAGCTGACCGAGGCCGTGCGTCGTCGTCCGTACTCGGTGGTGCTGTTCGACGAAGTCGAGAAAGCTAACCCCG AAGTCTTCGACGTGCTGCTGCAGGTGCTGGACGACGGGCGTCTGACCGACGGCCAAGGCCGGACTGTGGACTTCAAGAAC ACGATCCTGATCATGACCTCGAACCTCGGCTCGCAGTTCCTGGTGAACCAGGACATGGACGCGGATGCCAAGAAGAAGGC CGTGATGGACGCGGTGCACATGAACTTCAAGCCGGAGTTCCTGAACCGTCTGGACGAGATCGTGATGTTCCATCCGCTGA CCCGTGAGGAGCTGGGCGGCATCGTCAGCATCCAGGTCGCTCAGGTGGCCTCGCGTCTGACGGATCGCCGCATCAAGCTC GACGTCACCGACGCGGCTCGCGAATGGCTCGCCAACACCGGCTATGACCCGGCGTACGGCGCTCGTCCGCTGCGCCGTCT GGTGCAGACCGAGGTCGGCGACCAGCTGGCGCGCATGCTGCTCGCCGGCAAGGTACACGACGGCGACACCGTGCTCGTCA ACCAGACCGGTGGCGAGCATCTGGAACTCGGTACCATGCCCGAGGATCCGGATGCCGGCTCCGATACCGACGTCACGGTC GAAGACGTCACCGAAGACAAATGA Protein sequence : MEQKFTTMAQEVIGDAIQSASAAGNAQVETLHVMDALLRQENGVIQGLIQAAGGSPQAIGAAVRNALVKMPAASGSTTSQ PQASRQLTAALAQAEKEMQQMGDEYVSTEHLLIGIAASAPNQSADILKANGVTAAALRKAVPGVRGGAKVTSPDAEGSYK ALEKYSTDLTARAKEGKLDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPTTLQNKKLIS LDLGSMVAGSKYRGEFEERLKSVLNEIKNADGQIITFIDEIHTIVGAGAAEGSMDAGNMLKPMLARGELRLIGATTLDEY RENIEKDPALERRFQQVFVGEPSVEDTIAILRGLKQRYEAHHKVTIGDDALVAAATLSNRYISGRQLPDKAIDLVDEAAA HLRMELDSSPEEIDELQRKVTRYEMEEMQLKKAEDPASKERLEKLQNELANTREKLSGLKARWDAEKAGHNKVGDLRAQL DAKRVEADKFTREGNLAEASKILYGEIPAIQKQLDAAEKADAEDGATGETKPEPMVPDHVDADSVAGIVSEWTGIPVGRL MQGENEKLLSMEDYLGKRVIGQKEAIAAVSDAVRRSRAGISDPNRPTGSFLFLGPTGVGKTELAKALADFLFDDEKAMVR IDMSEYMEKASVSRLIGAAPGYIGYEEGGQLTEAVRRRPYSVVLFDEVEKANPEVFDVLLQVLDDGRLTDGQGRTVDFKN TILIMTSNLGSQFLVNQDMDADAKKKAVMDAVHMNFKPEFLNRLDEIVMFHPLTREELGGIVSIQVAQVASRLTDRRIKL DVTDAAREWLANTGYDPAYGARPLRRLVQTEVGDQLARMLLAGKVHDGDTVLVNQTGGEHLELGTMPEDPDAGSDTDVTV EDVTEDK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 1e-106 | 42 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 8e-107 | 42 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 2e-102 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_006393745.1 | ATP-dependent chaperone | VFG2076 | Protein | 4e-117 | 42 |
| clpB | YP_006393745.1 | ATP-dependent chaperone | VFG2084 | Protein | 7e-110 | 42 |
