Gene Information

Name : BBB_0151 (BBB_0151)
Accession : YP_006393626.1
Strain : Bifidobacterium bifidum BGN4
Genome accession: NC_017999
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 181687 - 182166 bp
Length : 480 bp
Strand : -
Note : COG1576:Uncharacterized conserved protein

DNA sequence :
ATGCGTATTAGCGTCATTTGCGTCGGCAGGGTCAAAGAGCAGTATCTGCGCGACGCCATCGCCGAATACAGCAAACGGCT
CGGCCGCTACTGCAAGCTCGACATCATCGAGGTCGCCGACGAGAAGACCCCCGAACATGCCAGCGAAGGCGTGGAACGGC
AGATTCGTGCCAAGGAAGGCGGGCGCATCGCCAAGCACATCCGCCCCGACGCCTATGTGATCGCGCTGGCGATCGACGGC
ACGATGCTCTCCTCCGAAGGGCTCGCCGCGCACATCAACCAGCTCGGATTGCACGGCGAAAGCCACATACAGCTCATCAT
CGGCGGCTCGATCGGCCTGGACGACGCGATTCTGCGCCGCGCCGACTACAGGCTCAGCTTCTCGAAGATGACGTTCCCGC
ATCAGCTGATGCGCGTGATCCTACTGGAGCAGCTGTACCGCGCCTACAAAATCAACGCCGGCGAGCCATACCACAAGTAG

Protein sequence :
MRISVICVGRVKEQYLRDAIAEYSKRLGRYCKLDIIEVADEKTPEHASEGVERQIRAKEGGRIAKHIRPDAYVIALAIDG
TMLSSEGLAAHINQLGLHGESHIQLIIGGSIGLDDAILRRADYRLSFSKMTFPHQLMRVILLEQLYRAYKINAGEPYHK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAC57492.1 hypothetical protein Not tested Type-IIIinv SCCmec Protein 3e-44 57
unnamed BAB72121.1 hypothetical protein Not tested Type-IVa SCCmec Protein 3e-44 57
SAR0024 YP_039501.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 4e-44 57
unnamed BAB72138.1 open reading frame X Not tested Type-IVb SCCmec Protein 3e-44 57
SAV0024 NP_370548.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 4e-44 57
unnamed BAC67575.1 open reading frame X Not tested Type-IVc SCCmec Protein 3e-44 57
unnamed BAA82243.1 orfX Not tested Type-II SCCmec Protein 3e-44 57
unnamed BAD24821.1 conserved hypothetical protein orfX Not tested Type-V SCCmec Protein 3e-44 57
orfX BAA86653.1 open reading frame X Not tested Type-I SCCmec Protein 3e-44 57
unnamed BAG06184.1 conserved hypothetical protein orfX Not tested Type-VII SCCmec Protein 3e-44 57
unnamed BAB47681.1 open reading frame X Not tested Type-III SCCmec Protein 3e-44 57
unnamed BAC53844.1 open reading frame X Not tested SRImec-III and SCCmec-III region Protein 3e-44 57
orfX AAL26648.1 unknown Not tested SCCcap1 Protein 7e-43 56
orfXhom BAB83497.1 open reading frame X Not tested SCC 12263 Protein 2e-41 55
SSP0026 YP_300116.1 rRNA large subunit methyltransferase Not tested SCC15305RM Protein 2e-42 55
orfX YP_251938.1 rRNA large subunit methyltransferase Not tested SCCmec Protein 2e-43 54
SE0023 NP_763578.1 rRNA large subunit methyltransferase Not tested SCCpbp4 Protein 3e-43 54
SERP2529 YP_190070.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 3e-43 54