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Name : lysS (BBB_1473) Accession : YP_006394943.1 Strain : Bifidobacterium bifidum BGN4 Genome accession: NC_017999 Putative virulence/resistance : Unknown Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 1743894 - 1745585 bp Length : 1692 bp Strand : - Note : COG1190:Lysyl-tRNA synthetase (class II) DNA sequence : ATGAGTCAGACGCAAGAAACCCCCAAATCCCTGAACGACGACGAGACGGCGCCCGCTGTTCCCGTCATGACCACGGTCGA ACGTGCCGAGATGCTGCTGCGACAGGACGCAGCCATCCGCGACCGCATCGGCGCCGGCGCAACTTTGGACGAGGCCGTCG ATCCCTCCAACAAGGAGTTCGGCCCGCTCGCGCACCCCGAGCAGGTGCAGATGCGCGTCGCCAAGCGCGCGATGATGCTT GAGGCCGGCATGCAGCCCTACCCGGTGCACCTCGACGTGACCGACACCATCGAGGCTGTGCGCGCCAAGTATGACGGCAA GCTTGAAGCCGGTCAGGAGACCGAGGACGTGGTCGGCATCGCCGGGCGCGTCCTGTTTCTGCGCAACGGCGGCGGCCTGT GCTTCGTGCAGCTGTCGGCCGGCGACGGCACGAAGATCCAGGGCATGATCTCCAAGAAGGAGATCGGCGCTGACTCGCTC AAGCAGTTCAAGCAGCTCGTGGACCTCGGCGACCACCTGTACCTGCGCGGCCGCGTGATCGCGTCCAAGACCGGCGAGCT GTCGGTGTTCGCCACCGAATGGGCCATCGCGTCCAAGGCGCTGCAGCCGCTGCCCGCCCTGCACAAGGACCTGAACGACG ACACGCGCACGCGCAAGCCGTACATCGGCATGATCGCCGATGAGAAGGTGCGCAACATGGTGCGCAACCGGTCCAAGGCC GTCGCCTCGCTGCGCCGCACGTTCGATGACCACGACTTCATCGAGGTCGAGACGCCGATGCTGCAGACTATCCACGGCGG TGCCGCCGCCCGTCCGTTCACCACGCACATGAACGCCTTCGACCTGGACCTTTATCTGCGCATCGCGCCGGAACTGTTCC TCAAGCGCTGCCTCGTGGGCGGCATCGACCGCGTGTTCGAGATCAACCGCGACTTCCGCAACGAGGGCGTCGACGCCACG CACGCCCCCGAGTTCACGATGGTCGAGGCCTACCAGGCGTACGGCACCTACGACACCATCGGTCAGCTGGTCAAGGAGCT CGTGCAGAAGACCGCGATGGACGTGTTCGGCTCCCATAAGGTCACGCTGCTCGACGGCACCGAATACGATTTCGGCGGCG ACTGGAAGACCATCAGCATGTATGATTCGCTCTCCGAGGCGCTCGGCGAAGAGATCGTGCCGAACGGCGGGCCGGACAAC CCCGGCACTTCCGTGGAGCATCTGGGCGAGATCGCCGACAAGCTCGGCGTGGAGCGTGACGACGTTGAGAACCACGGCAA GCTCGTCGAGCACCTGTGGGAGCACTTCTACGAGGACAAGCTATACGAGCCGACCTTCGTGCGCGACTTCCCGGTCGAGA CCTCCCCGCTGGTCAAGGGCCACCGCAACAAGGCCGGCGTGGTGGAGAAGTGGGACCTCTACGTGCGCGGCTTCGAGCTG GCCACCGGCTACTCCGAGCTCAACGACCCGATCGTGCAGCGCGAGCGTTTCGTGGCCCAGGCCAAGGACGCGCTGGCCGG CGACGAGGAGGCCTGCGACATCGACGAGGACTTCTTGGAGGCCCTCGGCGTGGGCATGCCCCCGGCGGGCGGCATGGGCA TGGGCATCGACCGACTGCTCATCGCCCTGACCGGTGCCACGATCCGCGAGACCATCACCTTCCCGCTGGTCAAGCCGCTG GCGTTGCAGTAA Protein sequence : MSQTQETPKSLNDDETAPAVPVMTTVERAEMLLRQDAAIRDRIGAGATLDEAVDPSNKEFGPLAHPEQVQMRVAKRAMML EAGMQPYPVHLDVTDTIEAVRAKYDGKLEAGQETEDVVGIAGRVLFLRNGGGLCFVQLSAGDGTKIQGMISKKEIGADSL KQFKQLVDLGDHLYLRGRVIASKTGELSVFATEWAIASKALQPLPALHKDLNDDTRTRKPYIGMIADEKVRNMVRNRSKA VASLRRTFDDHDFIEVETPMLQTIHGGAAARPFTTHMNAFDLDLYLRIAPELFLKRCLVGGIDRVFEINRDFRNEGVDAT HAPEFTMVEAYQAYGTYDTIGQLVKELVQKTAMDVFGSHKVTLLDGTEYDFGGDWKTISMYDSLSEALGEEIVPNGGPDN PGTSVEHLGEIADKLGVERDDVENHGKLVEHLWEHFYEDKLYEPTFVRDFPVETSPLVKGHRNKAGVVEKWDLYVRGFEL ATGYSELNDPIVQRERFVAQAKDALAGDEEACDIDEDFLEALGVGMPPAGGMGMGIDRLLIALTGATIRETITFPLVKPL ALQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 2e-135 | 56 |
