Gene Information

Name : Tsac_0980 (Tsac_0980)
Accession : YP_006391595.1
Strain : Thermoanaerobacterium saccharolyticum JW/SL-YS485
Genome accession: NC_017992
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1026002 - 1028434 bp
Length : 2433 bp
Strand : +
Note : KEGG: txy:Thexy_0302 ATPase AAA-2 domain protein; PFAM: ATPase associated with various cellular activities, AAA-2; Clp, N-terminal; ATPase, AAA-type, core; UvrB/UvrC protein; Clp ATPase, C-terminal; SMART: ATPase, AAA+ type, core

DNA sequence :
ATGGCGATGTTTGGCAGATTTTCAGAAAAAGCACAAAAAGTGCTTTATCAAGCACAAGAGGAAGCTCGCTCACTATATCA
CAATTACGTGGGAACGGAGCATATCCTTTTAGGACTTATTAAAGAAGAAGATGGCATAGCATCGAGGGTCTTAAAGAGCC
TTGGTGTCACTTATGAAGACATAAGATCAAAGGTAGAATCACTTATTGGAATGGGAAATGTGCCTGGCGATGTGGTAGGA
TATACGCCAAGAGCAAAGAGGGTTTTGGAGCTTAGCTTTGCTGAAGCAAGAAGGTTTAATACAAATTACATCGGAACAGA
GCACATCTTATTAGGACTTATTAGGGAAGGTGAAGGCGTAGCAGTAAGGATTTTGATGGAGTTAGGTGTAGACTTCAACA
GAGTCAGAGAAGAAATAGTGAAGATGGTAAGCGAAGAGCCTTCTGGAACTACAAATAAAGCGCAAAGAGTCAAGAATACA
AATACGCCCAATTTAAACCAGTTTGGAAGGGATCTTACAGAGCTTGCAAGGGAAGGAAAGTTAGACCCTGTAATTGGGCG
CGAGAAGGAGATAGAGAGAGTAATACAGATTTTAAGCAGAAGGACTAAAAACAATCCATGCCTTATCGGCGAACCTGGAG
TCGGTAAGACTGCAATTGCCGAAGGATTGGCAGAGGCCATCGAAAGTGGTACTATACCAGAGATTTTAAAGGGCAAACGA
GTTGTAACATTAGACATGGCTTCAATGGTTGCCGGCACAAAGTACAGAGGTGAATTTGAGGATAGGCTGAAAAATGTATT
AAATGAAGTCATTAAAGCAGGAAATGTCATACTTTTTATAGATGAGCTTCACACTATAATAGGTGCTGGCGCGGCAGAAG
GTGCAATAGACGCATCTAATATCTTAAAACCGGCTCTTGCAAGAGGAGAGATACAAGTCATCGGTGCGACAACAATAGAT
GAATACAGGAAGTACATTGAAAAAGATCCTGCCCTCGAGAGGAGATTTCAACCTATAATGGTTGAAGAGCCATCTGTCGA
AGAAACGATAGAAATATTAAAAGGACTTAGGGACAAATACGAAGCGCATCACAGAATAAAAATTACTGATGAAGCGATTG
AAGCAGCGGCAAAACTTTCACACAGGTATATAACAGATAGATTCCTTCCTGACAAAGCTATAGACCTTATAGATGAAGCT
GCATCGAGAGTCAGACTAAAGACGGTTACAGCGCCGCCAGAGATAAAAGAACTGGAAGACAAATTGAATATGCTTAATAA
AGACAAAGAAGAAGCTATAAGGACGCAGGAGTATGAAAAGGCTGCTAAGATAAGAGATGAAGAGCAAAAAGTTAAAGAGC
AACTGGAGAATCTGAAATCAAAGTGGCAGCAAAATTCATTGGTGAAAGAAAAAAGCGTTGGAGCTGAGGAGATTTCACAA
ATTGTATCTCTTTGGACTGGCATTCCAACGCAGAAACTCGCCCAAGAGGAATCTGAAAGACTTTTGCATTTAGAAGAGAT
ACTGCACAAGCGTGTAATAGGTCAGGACGAAGCAGTGGATGCAGTGGCAAGAGCCATAAGAAGGGCAAGAGTTGGACTTA
AAGATCCAAAAAGACCTATTGGATCGTTTATATTCTTAGGGCCAACAGGTGTCGGCAAGACAGAGCTTAGCAAAGCGTTA
GCTGAAGCCATGTTTGGAGACGAATCAGCGATAGTCAGAATAGATATGTCTGAGTATATGGAAAAATTCTCTGTATCAAG
GCTTATTGGTTCTCCTCCAGGATATGTGGGATATGAAGAAGGCGGGGAGCTTACAGAGAAAATAAGGAGAAAGCCGTATT
CTGTCATATTGTTTGACGAAATTGAAAAGGCCCATCCAGATGTGTTTAATATACTATTGCAGATATTAGACGATGGAAGG
CTGACAGATTCAAAAGGCAGAACGGTGGACTTCAAAAATACACTCATAATAATGACTTCCAACGTTGGGGCACAGCTTAT
TAAGAAGCAGACGACTTTAGGCTTTATGCCTGAAAGCAACGCAGAAAAAGAGTCGTACGAAAAGATGAAGGAAAACATCT
TAGAGGAGCTTAAAAAATCATTTAGACCTGAATTTTTAAACAGGATTGATGATATCATCGTATTCCGTCAACTGACACAG
GACGACATAAGGAAGATTACCGATTTGATGATAGCTGATTTGAACAAGAGGCTTAAAGATAACAATATAAGCCTTGAATT
TACAGATGATGCAAAAGAGGAGCTTCTTAAAGAAGGTTATGATGTGACTTACGGTGCAAGACCATTAAGAAGGGCTATAC
AAAAGGTTGTTGAAAGTGAGCTTTCTGAGCTTATGCTGAAAGGCGAGATAAAATCCGGCGATAAAATTTTAGTTAAGTTA
AAGGACGGCAAATTTGACTTTACAAAAGTTTAA

Protein sequence :
MAMFGRFSEKAQKVLYQAQEEARSLYHNYVGTEHILLGLIKEEDGIASRVLKSLGVTYEDIRSKVESLIGMGNVPGDVVG
YTPRAKRVLELSFAEARRFNTNYIGTEHILLGLIREGEGVAVRILMELGVDFNRVREEIVKMVSEEPSGTTNKAQRVKNT
NTPNLNQFGRDLTELAREGKLDPVIGREKEIERVIQILSRRTKNNPCLIGEPGVGKTAIAEGLAEAIESGTIPEILKGKR
VVTLDMASMVAGTKYRGEFEDRLKNVLNEVIKAGNVILFIDELHTIIGAGAAEGAIDASNILKPALARGEIQVIGATTID
EYRKYIEKDPALERRFQPIMVEEPSVEETIEILKGLRDKYEAHHRIKITDEAIEAAAKLSHRYITDRFLPDKAIDLIDEA
ASRVRLKTVTAPPEIKELEDKLNMLNKDKEEAIRTQEYEKAAKIRDEEQKVKEQLENLKSKWQQNSLVKEKSVGAEEISQ
IVSLWTGIPTQKLAQEESERLLHLEEILHKRVIGQDEAVDAVARAIRRARVGLKDPKRPIGSFIFLGPTGVGKTELSKAL
AEAMFGDESAIVRIDMSEYMEKFSVSRLIGSPPGYVGYEEGGELTEKIRRKPYSVILFDEIEKAHPDVFNILLQILDDGR
LTDSKGRTVDFKNTLIIMTSNVGAQLIKKQTTLGFMPESNAEKESYEKMKENILEELKKSFRPEFLNRIDDIIVFRQLTQ
DDIRKITDLMIADLNKRLKDNNISLEFTDDAKEELLKEGYDVTYGARPLRRAIQKVVESELSELMLKGEIKSGDKILVKL
KDGKFDFTKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tsac_0980 YP_006391595.1 ATPase VFG0079 Protein 0.0 62
Tsac_0980 YP_006391595.1 ATPase VFG0080 Protein 3e-140 52