Gene Information

Name : Tsac_0466 (Tsac_0466)
Accession : YP_006391093.1
Strain : Thermoanaerobacterium saccharolyticum JW/SL-YS485
Genome accession: NC_017992
Putative virulence/resistance : Unknown
Product : IstB domain-containing protein ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 496023 - 496796 bp
Length : 774 bp
Strand : +
Note : KEGG: toc:Toce_1954 IstB transposition helper protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core

DNA sequence :
ATGATAGATCTAGAGAAAGCCAGACTACATCTTGAAGAACTGGGACTTCTGAATGCAGCTTCTTTACTTGATTCACTCCT
TGAAAGAGCGCAGCACAAAAACAGCACATATCTTGACTTCTTAAATGAGCTTCTTGAAACAGAGCTTTCAGAAAGGCAGA
AGAGAAATATTGAGGTAAGATTCAAACTAGCCCGACTCCCATACAGAAAAACACTATCAGAATTTGACTTTACATTTCAG
CCAAGTGTAGATGAGAAGCTGATAAAAGAACTTGCTACAATGGCCTTCGTACACCGTGCGGAAAATGTGATATTTCTTGG
ACCTCCTGGAGTGGGTAAGACACATCTAGCTGTAGCACTTTCTGTAGAAGCACTATCGCAGGGGATACCAATTTACTTTA
TCACCCTATCAAAACTAATTGAAGACCTTAAAAAAGGTTATGAAGAGAGCAGATTAGAAAGGAGGATGAGGAACTACATA
AGGCCAAGGCTTCTTGTTGTAGATGAAGTAGGGTATTTACCTTTAGACAACCTTGGAGCAAATCTCTTTTTTCAGCTAGT
AAGTACACGGTATGAGAGAGGAAGCATAATACTTACAAGCAACAAAGGATTTGGGGAATGGGGTGAACTAATGGGGCATC
CAGTTCTTGCAACTGCGGTTTTGGACAGATTGCTGCACCATGCTCATATAATCAACATAAGAGGTAACAGCTATCGTTTA
AAGGATAGGCTAAAGACTGGTCTTTATTACGGTAGTCCAAACGGGAAGGCTTAA

Protein sequence :
MIDLEKARLHLEELGLLNAASLLDSLLERAQHKNSTYLDFLNELLETELSERQKRNIEVRFKLARLPYRKTLSEFDFTFQ
PSVDEKLIKELATMAFVHRAENVIFLGPPGVGKTHLAVALSVEALSQGIPIYFITLSKLIEDLKKGYEESRLERRMRNYI
RPRLLVVDEVGYLPLDNLGANLFFQLVSTRYERGSIILTSNKGFGEWGELMGHPVLATAVLDRLLHHAHIINIRGNSYRL
KDRLKTGLYYGSPNGKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 2e-45 41
api84 CAF28558.1 putative transposase Not tested YAPI Protein 2e-45 41
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 2e-45 41
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 2e-45 41
unnamed CAA21402.1 - Not tested HPI Protein 2e-45 41
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 9e-45 41
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 2e-45 41
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 2e-45 41
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 2e-45 41
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 3e-45 41
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 2e-45 41
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 3e-45 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tsac_0466 YP_006391093.1 IstB domain-containing protein ATP-binding protein VFG1627 Protein 1e-45 41
Tsac_0466 YP_006391093.1 IstB domain-containing protein ATP-binding protein VFG1606 Protein 1e-45 41
Tsac_0466 YP_006391093.1 IstB domain-containing protein ATP-binding protein VFG1663 Protein 5e-45 41
Tsac_0466 YP_006391093.1 IstB domain-containing protein ATP-binding protein VFG1515 Protein 1e-45 41