Gene Information

Name : Tsac_0277 (Tsac_0277)
Accession : YP_006390910.1
Strain : Thermoanaerobacterium saccharolyticum JW/SL-YS485
Genome accession: NC_017992
Putative virulence/resistance : Unknown
Product : Xylose isomerase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 290152 - 291471 bp
Length : 1320 bp
Strand : -
Note : TIGRFAM: Xylose isomerase, bacterial type; HAMAP: Xylose isomerase; KEGG: txy:Thexy_2149 Xylose isomerase; PFAM: Xylose isomerase, TIM barrel domain

DNA sequence :
ATGAATAAATATTTTGAGAACGTATCTAAAATAAAATATGAAGGACCAAAATCAAACAATCCTTATTCTTTTAAATTTTA
CAATCCAGAAGAAGTAATCGATGGCAAGACGATGGAGGAGCATCTACGCTTTTCTATAGCTTACTGGCACACTTTTACTG
CTGATGGAACAGATCAATTTGGCAAAGCTACCATGCAAAGACCATGGAACCACTACACAGATCCTATGGACATAGCAAAG
GCAAGGGTAGAAGCAGCATTTGAGTTTTTTGATAAGATAAATGCACCTTTCTTCTGCTTCCATGACAGGGATATTGCACC
TGAAGGAGACACTCTTAGAGAGACAAACAAAAACTTAGATACAATAGTTGCCATGATAAAGGATTACTTGAAGACCAGCA
AGACGAAAGTTTTGTGGGGCACCGCAAATCTTTTCTCCAATCCGAGATTTGTACATGGTGCATCAACATCCTGCAATGCT
GATGTTTTCGCATATTCTGCAGCTCAAGTTAAAAAAGCTCTTGAGATTACTAAGGAGCTTGGCGGCGAAAACTACGTATT
CTGGGGTGGCAGAGAAGGATATGAAACACTTCTCAATACAGACATGGAGTTTGAGCTTGACAACTTTGCAAGATTTTTGC
ACATGGCTGTTGACTACGCGAAGGAAATCGGCTTTGAAGGCCAGTTCTTGATTGAGCCGAAGCCAAAGGAGCCTACGAAA
CACCAATACGACTTTGACGTGGCAAATGTATTGGCATTCTTGAGAAAATACGGCCTTGACAAATATTTCAAAGTGAATAT
CGAGGCAAACCATGCGACATTGGCATTCCACGACTTCCAACATGAGCTAAGATACGCCAGAATAAACGGTGTATTAGGAT
CAATTGACGCAAATACAGGCGATATGCTTTTAGGATGGGATACAGACCAGTTCCCTACAGATATACGCATGACAACGCTT
GCTATGTATGAAGTCATAAAGATGGGTGGATTTGACAAAGGCGGCCTTAACTTCGATGCAAAAGTAAGACGTGCTTCATT
TGAACCAGAAGATCTTTTCTTAGGTCATATAGCCGGAATGGATGCCTTTGCAAAAGGCTTCAAAGTTGCTTACAAACTTG
TGAAAGATGGCGTATTTGACAAGTTCATCGAGGAAAGATACGCAAGCTACAAAGACGGCATTGGCGCTGACATTGTAAGC
GGGAAAGCTGACTTCAAGAGCCTTGAAAAGTACGCATTAGAGCACAGCCAGATTGTCAACAAATCAGGCAGGCAAGAGCT
GTTAGAATCAATCCTAAATCAGTATTTGTTTGCAGAATAA

Protein sequence :
MNKYFENVSKIKYEGPKSNNPYSFKFYNPEEVIDGKTMEEHLRFSIAYWHTFTADGTDQFGKATMQRPWNHYTDPMDIAK
ARVEAAFEFFDKINAPFFCFHDRDIAPEGDTLRETNKNLDTIVAMIKDYLKTSKTKVLWGTANLFSNPRFVHGASTSCNA
DVFAYSAAQVKKALEITKELGGENYVFWGGREGYETLLNTDMEFELDNFARFLHMAVDYAKEIGFEGQFLIEPKPKEPTK
HQYDFDVANVLAFLRKYGLDKYFKVNIEANHATLAFHDFQHELRYARINGVLGSIDANTGDMLLGWDTDQFPTDIRMTTL
AMYEVIKMGGFDKGGLNFDAKVRRASFEPEDLFLGHIAGMDAFAKGFKVAYKLVKDGVFDKFIEERYASYKDGIGADIVS
GKADFKSLEKYALEHSQIVNKSGRQELLESILNQYLFAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
xylA NP_814326.1 xylose isomerase Not tested Not named Protein 1e-125 59
ef0082 AAM75286.1 EF0082 Not tested Not named Protein 9e-126 59