Gene Information

Name : Tsac_2298 (Tsac_2298)
Accession : YP_006392901.1
Strain : Thermoanaerobacterium saccharolyticum JW/SL-YS485
Genome accession: NC_017992
Putative virulence/resistance : Unknown
Product : RpiR family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2358772 - 2359623 bp
Length : 852 bp
Strand : -
Note : PFAM: Helix-turn-helix protein RpiR; Sugar isomerase (SIS); KEGG: tte:TTE2419 transcriptional regulator

DNA sequence :
ATGCAGGAGCAAAATAGTGTTGTATTAAAAATTAGAAGTGTATATAATTCATTGACAAATGCTGAAAAAAAAGTAGCTGA
CTATGTTCTTGAGAACTCGGAAGAAGTGCTTTATTCTTCAATAACAGAACTCGCAGAAAAAATTAATGTAGGTGAAACAA
CAATAATAAGATTCTGCAGGCATATTGGATTAACTGGCTTTCAGGATTTCAAATTAAATATTGCGAAAGAGACAACGAGC
CCAGAAACAAGCATACACGAGAATATAACTTTTAGTGATACAATTGATGTACTTTTACAAAAAATAACTACAGAGAATAC
AATGGCTATTTCAAATACGACAAAAATGTTGTTAGTCAGTGAACTTGAGAAGGCTGTCGAAGAAATCATAAAGGCGAATA
AGATAGAGATATATGGTGTTGGCGCATCTGGCTATACTGTACTTGATGCAAAGTATAAATTTATGAGGCTTGGCTTAAAC
GTTGATGCTAATTTAGATCCACATATACAGGCCATATCAGCGGTTAACCTTAAGGAAGGTGATGTAGCAATTGGAATATC
TTTTTCAGGTAGTACAAAAGATACTGTAGAAACATGTAAGTTAGCTAAAGAAGCTGGAGCAAAAGTTATTTGCATTACAA
ATTATGCAAGATCGCCTATTACTGCAGTAGCGGATATAGTATTGCTAACATCTGCAAAAGAAACGCCATTAAGAAGTGGT
GCTTTAACTTCTAAAATAGCTCAGCTTCATATACTTGATATTTTATATACGTGTATAGCAGTGAAAATGAAAGATAAAGC
AGTTCAAAATCTAAACAAAACTGCTAAAGCAGTTTTAGATAAATTGTATTGA

Protein sequence :
MQEQNSVVLKIRSVYNSLTNAEKKVADYVLENSEEVLYSSITELAEKINVGETTIIRFCRHIGLTGFQDFKLNIAKETTS
PETSIHENITFSDTIDVLLQKITTENTMAISNTTKMLLVSELEKAVEEIIKANKIEIYGVGASGYTVLDAKYKFMRLGLN
VDANLDPHIQAISAVNLKEGDVAIGISFSGSTKDTVETCKLAKEAGAKVICITNYARSPITAVADIVLLTSAKETPLRSG
ALTSKIAQLHILDILYTCIAVKMKDKAVQNLNKTAKAVLDKLY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0539 NP_814311.1 RpiR family phosphosugar-binding transcriptional regulator Not tested Not named Protein 2e-35 42
ef0065 AAM75270.1 EF0065 Not tested Not named Protein 2e-35 42