Gene Information

Name : Tsac_1797 (Tsac_1797)
Accession : YP_006392402.1
Strain : Thermoanaerobacterium saccharolyticum JW/SL-YS485
Genome accession: NC_017992
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliQ
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1859878 - 1860147 bp
Length : 270 bp
Strand : +
Note : KEGG: txy:Thexy_1316 flagellar biosynthetic protein FliQ; TIGRFAM: Flagellar biosynthesis protein FliQ; PFAM: Bacterial export protein FliQ, family 3

DNA sequence : 
ATGGATCCGGGAGTAGTTCTTGATATAGGAAGAGAGGCATTAATGGTAACTATGATGGTTTCTGCACCTCTTCTAATTAT
ATCATTGCTTGTAGGATTGATAATAAGTATTTTTCAGGCTACAACCCAAATTCAAGAACAGACATTGACATTTGTGCCTA
AAATTTTAGCAATATTTGCATCTATTATATTATTTGGGCCATGGATGCTTACGGTACTTATTAATTACACTCAAAAATTG
ATTTTAAATATTAACAGTTTCATCAGGTAG

Protein sequence : 
MDPGVVLDIGREALMVTMMVSAPLLIISLLVGLIISIFQATTQIQEQTLTFVPKILAIFASIILFGPWMLTVLINYTQKL
ILNINSFIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
escS AFO66341.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 1e-04 41
escS AFO66401.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 1e-04 41
escS YP_003223489.1 T3SS structure protein EscS Virulence LEE Protein 0.001 41
escS YP_003232139.1 T3SS structure protein EscS Virulence LEE Protein 0.001 41
escS AAK26701.1 EscS Virulence LEE Protein 9e-04 41
escS AAL57528.1 EscS Virulence LEE Protein 9e-04 41
escS CAC81848.1 EscS protein Virulence LEE II Protein 9e-04 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tsac_1797 YP_006392402.1 flagellar biosynthetic protein FliQ VFG1260 Protein 2e-11 52
Tsac_1797 YP_006392402.1 flagellar biosynthetic protein FliQ VFG2339 Protein 2e-10 45
Tsac_1797 YP_006392402.1 flagellar biosynthetic protein FliQ VFG2495 Protein 2e-09 42