Gene Information

Name : Tsac_1796 (Tsac_1796)
Accession : YP_006392401.1
Strain : Thermoanaerobacterium saccharolyticum JW/SL-YS485
Genome accession: NC_017992
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1859116 - 1859865 bp
Length : 750 bp
Strand : +
Note : KEGG: txy:Thexy_1317 flagellar biosynthetic protein FliP; TIGRFAM: Flagellar transport protein FliP; PFAM: Type III secretion system inner membrane P protein

DNA sequence : 
ATGATAAAGATAAAAAAAATTAGTTGGTTGGTGCTTGTATTGCCAATTTTATTGATACAAAATGCATATGCAGCTCCAAA
TAACGCTTCGCCGTTAATAACGATCAATGCTCCATCGACTTCTAATGAAGTTGCATCAAGCATCCAAATAGTTCTTCTTT
TGACTGTATTGACATTAGCGCCATCAATACTTATAATGATGACTTCTTTTACAAGGATAATTGTGGTTTTATCGTTTTTA
AGAAACGCCTTAGGTTTACAGCAAATGCCTCCAAATCAAGTTTTAATTGGTCTGGCTTTGTTTTTGACGTTTTTTATAAT
GGCACCAGTTGGTGCACAAATAAATAAAGATTCTATCCAGCCATATATGCAAGGAAAGATAACACCACAAGAAGCTTATG
TTAAGGCAAGAGATCCGTTGAAAAGCTTTATGCTTAAGCAGACGAGGAAAAATGACTTAAATTTGTTTATCAGTTTGTCA
AAGCTGAAAGTAAAAAGTGTAAATGATGTTCCTTTGCGAGTTGTTATACCCTCATTCATAATAAGTGAATTGAAAACGGC
ATTTGAAATTGGATTTATCATATATATACCATTTTTAATCATAGACATGGTTGTTGCCAGTGTATTGATGTCGATGGGGA
TGTTCATGCTGCCACCTGTACTTATATCCTTGCCATTTAAACTTTTGCTTTTCATACTTGTGGATGGATGGAATATTTTG
GTTAAGTCTTTAGTAATTGGTTTTAGATAA

Protein sequence : 
MIKIKKISWLVLVLPILLIQNAYAAPNNASPLITINAPSTSNEVASSIQIVLLLTVLTLAPSILIMMTSFTRIIVVLSFL
RNALGLQQMPPNQVLIGLALFLTFFIMAPVGAQINKDSIQPYMQGKITPQEAYVKARDPLKSFMLKQTRKNDLNLFISLS
KLKVKSVNDVPLRVVIPSFIISELKTAFEIGFIIYIPFLIIDMVVASVLMSMGMFMLPPVLISLPFKLLLFILVDGWNIL
VKSLVIGFR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaR CAA68199.1 secretion system apparatus, SsaR Virulence SPI-2 Protein 2e-22 43
ssaR YP_216427.1 type III secretion system protein Virulence SPI-2 Protein 2e-22 43
ssaR NP_460384.1 type III secretion system protein Virulence SPI-2 Protein 2e-22 43
XC_3016 YP_244084.1 type III secretion system protein Virulence Hrp PAI Protein 8e-29 43
hrcR NP_636600.1 type III secretion system protein Virulence Hrp PAI Protein 8e-29 43
hrcR AAP34349.1 HrcR Virulence Hrp PAI Protein 9e-29 42
yscR NP_456109.1 putative type III secretion protein Virulence SPI-2 Protein 8e-22 42
yscR NP_805090.1 type III secretion system protein Virulence SPI-2 Protein 8e-22 42
hrcR YP_362153.1 type III secretion system protein Virulence Hrp PAI Protein 1e-28 42
hrcR AAD21321.1 HrcR Virulence Hrp PAI Protein 1e-28 42
hrcR NP_640757.1 type III secretion system protein Virulence Hrp PAI Protein 1e-28 42
hrcR BAB07862.1 HrcR Virulence Hrp PAI Protein 6e-28 41
hrcR YP_198720.1 type III secretion system protein Virulence Hrp PAI Protein 6e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tsac_1796 YP_006392401.1 flagellar biosynthetic protein FliP VFG2338 Protein 3e-45 58
Tsac_1796 YP_006392401.1 flagellar biosynthetic protein FliP VFG1259 Protein 1e-48 54
Tsac_1796 YP_006392401.1 flagellar biosynthetic protein FliP VFG2016 Protein 1e-46 53
Tsac_1796 YP_006392401.1 flagellar biosynthetic protein FliP VFG2494 Protein 7e-45 51
Tsac_1796 YP_006392401.1 flagellar biosynthetic protein FliP VFG0519 Protein 1e-22 43