Gene Information

Name : Tsac_1434 (Tsac_1434)
Accession : YP_006392040.1
Strain : Thermoanaerobacterium saccharolyticum JW/SL-YS485
Genome accession: NC_017992
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase pdxS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1506685 - 1507563 bp
Length : 879 bp
Strand : +
Note : TIGRFAM: Vitamin B6 biosynthesis protein; HAMAP: Pyridoxal biosynthesis lyase pdxS; KEGG: txy:Thexy_1813 Pyridoxal biosynthesis lyase PdxS; PFAM: Vitamin B6 biosynthesis protein; Indole-3-glycerol phosphate synthase

DNA sequence :
ATGAATGAAAGATATGAGTTAAATAAAAACTTGGCCCAGATGTTAAAAGGCGGAGTTATAATGGATGTTACAACACCTGA
ACAGGCTGTAATTGCAGAAAAGGCAGGCGCAGTTGCGGTAATGGCACTTGAAAGGGTACCTGCTGATATAAGGGCACATG
GCGGCGTAGCAAGGATGTCAGATCCGAAGATAATAAAAGCCATCAAAGAAGCTGTGTCAATACCTGTCATGGCAAAAGTC
AGGATAGGACATTTTGTGGAAGCACAGGTTTTAGAAGCTTTAAAGATAGATTATATAGATGAAAGTGAAGTATTGACACC
TGCAGATGAATCATATCACATAAACAAGTGGCAGTTTAAAGTTCCATTTGTTTGCGGTGCAAGAAACTTAGGCGAAGCAT
TAAGGAGAATTGGCGAAGGCGCTTCAATGATAAGGACTAAAGGCGAAGCAGGCACAGGAAATGTAGTTGAAGCAGTAAGA
CATATGAGGACTATCAATGCCGAAATCAAAAAGCTTACGACTCTAAGCGAAGAAGAGCTTATGACAGCAGCAAAAGAATT
GCAAGCACCTTATGAATTAGTAAAATATGTTGCGAAAAACGGGAGACTACCAGTTGTGAATTTTGCAGCGGGTGGCATTG
CAACACCTGCAGATGCCGCACTGATGATGCAGCTTGGAGCAGATGGAGTCTTTGTAGGTTCAGGCATATTTAAATCAGAG
AACCCTGAAAAGCGCGCTGAAGCGATTGTAAAAGCTACGACATATTATGATAAACCAGAGATAATAGCAGAGGTATCAGA
AGGATTAGGAGAAGCAATGAATAGCATCGATATAAGGGATCTTTCAGAAAAAGATTTATATGCAAGTAGGGGCTGGTAA

Protein sequence :
MNERYELNKNLAQMLKGGVIMDVTTPEQAVIAEKAGAVAVMALERVPADIRAHGGVARMSDPKIIKAIKEAVSIPVMAKV
RIGHFVEAQVLEALKIDYIDESEVLTPADESYHINKWQFKVPFVCGARNLGEALRRIGEGASMIRTKGEAGTGNVVEAVR
HMRTINAEIKKLTTLSEEELMTAAKELQAPYELVKYVAKNGRLPVVNFAAGGIATPADAALMMQLGADGVFVGSGIFKSE
NPEKRAEAIVKATTYYDKPEIIAEVSEGLGEAMNSIDIRDLSEKDLYASRGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 8e-89 71
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-88 71
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 9e-89 70