Gene Information

Name : Tsac_0143 (Tsac_0143)
Accession : YP_006390778.1
Strain : Thermoanaerobacterium saccharolyticum JW/SL-YS485
Genome accession: NC_017992
Putative virulence/resistance : Unknown
Product : 2-deoxy-D-gluconate 3-dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 148404 - 149183 bp
Length : 780 bp
Strand : -
Note : KEGG: txy:Thexy_2035 2-deoxy-D-gluconate 3-dehydrogenase; TIGRFAM: 2-deoxy-D-gluconate 3-dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR

DNA sequence :
ATGCACAGCATTAATGATTTTTCAATGGACTTTTTCAGATTAGACGGAAAAGTGGCAATTGTGACAGGTGGGAATACAGG
ATTAGGACAAGGGTATGCGGTGGCTTTAGCGAAAGCCGGAGCTGATTTATTTATAGTTACCCATAATAATCGCTTTGATG
AAACAAGAGAGCTTATCGAAAAAGAAGGCGGCAAGGTGGAATTCTTCCAGACAGATTTATCGAGGAGAGAAAATATAAAT
GCAGTTGTAGACAGATGTCTTGAGGTTTATGGCAAGATTGATGTGCTTGTAAACAATGCAGGTACAATAAAAAGGTCTCC
TTTGCTTGAATACAAAGATGAAGATTGGAAGACTGTTTTAGACATCAATCTGAATGCGGTGTATTATTTAAGCCATGAAG
TGGCGAAGGTAATGGTCAAACAAGGTGGAGGAAAAATCATAAACATAGCTTCAATGCTTTCGTTTCAAGGCGGAAAATTT
GTACCGGCATATACGGCATCAAAACACGGGGTTGTAGGAATTACAAGGGCTTTTGCAAATGAATTGGCAGACAAAAACAT
ACAGGTAAATGCAATAGCTCCAGGATATATTGAAACCAACAATACAGCGCCAATAAGAGCTGATGAAAGCAGAAATGCCG
AGATACTTTCGAGAATACCTGCAGGAAGATGGGGTCACCCGTTTGACGTGATGGGAGCTTTAGTATTTTTGGCAAGCAAA
GCTTCAGACTATGTAAACGGACACGTATTAGCTGTCGATGGCGGCTGGCTTGTAAGGTGA

Protein sequence :
MHSINDFSMDFFRLDGKVAIVTGGNTGLGQGYAVALAKAGADLFIVTHNNRFDETRELIEKEGGKVEFFQTDLSRRENIN
AVVDRCLEVYGKIDVLVNNAGTIKRSPLLEYKDEDWKTVLDINLNAVYYLSHEVAKVMVKQGGGKIINIASMLSFQGGKF
VPAYTASKHGVVGITRAFANELADKNIQVNAIAPGYIETNNTAPIRADESRNAEILSRIPAGRWGHPFDVMGALVFLASK
ASDYVNGHVLAVDGGWLVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01499.1 2-deoxy-D-gluconate 3-dehydrogenase Not tested PAGI-1 Protein 6e-30 41