Gene Information

Name : Tsac_1354 (Tsac_1354)
Accession : YP_006391960.1
Strain : Thermoanaerobacterium saccharolyticum JW/SL-YS485
Genome accession: NC_017992
Putative virulence/resistance : Unknown
Product : alpha amylase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1419480 - 1421204 bp
Length : 1725 bp
Strand : +
Note : KEGG: txy:Thexy_0626 cyclomaltodextrinase; PFAM: Glycosyl hydrolase, family 13, catalytic region; Glycoside hydrolase, family 13, N-terminal Ig-like region; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region

DNA sequence :
ATGATAAGACAAGCTATATATCACAAAAGTGATGTTCCGTTTGCATATCCTTTAAATAAGGATGAGCTTCATATAGTTTT
AAGGACTGCTTCTACAGATATAAAAAGATGTTACATTTTTTATCGTGACAGATATGATTGGATGGGTAAGTTCAAAGTAA
AAGAAATGTTTTTAACTCAATCAAATGAGTTATTCGATTATTATGTAACGACACTTAAATTAAACAAGAAATTTGTATAC
TTTTTTTACTTAATATCTATGAAGGATGAAAGAGTCTACTATACGGAATCAGGTTTTTATGAGGAGAAGCCAGAGAATAG
CTTTCATGGTTTTTTTCAGTTTCCTTATATATGCGATATGGATGTTTTTTTTGCACCAAAATGGACAAGCGATTGCATTG
TATATCAAATATTCCCTGATAGGTTCAACAATGGAGATAAATCAAATGATCCAGAGAATGTGAGACCTTGGGGTGAGAGA
CCTGGACCAACTACATTTTTTGGGGGAGATATTCAGGGGATTATTGATAAAATTGAATATCTTAAGGAACTTGGAATTAA
TGCAATATATATGACGCCAATATTTTTGTCACCGTCTACACATAAATACAATACAACAGATTATTATAAAATAGATCCTC
ATTTTGGTGATACACAAAAGGCAAAAGAATTAATTGATAAATGCCATAAAAATGAGATAAGAGTGATTTTTGATGCTGTC
TTCAATCATTGCGGCTATGACTTTTTCGCATTTCAAGACGTAATTAAGAATGGGAAAGATTCAAAATATTGGGATTGGTT
TAACGTATATGAATGGCCTATAAAAACAACACCTCTTCCATCATATGAGGCTTTTGCGGATCATGAATGGAGAATGCCGA
AGCTTATGACTAAAAATCCTGATGTGCAAGAGTACTTGCTTAATGTTGCTGAATATTGGATTAAAGAAGTAGGCATTGAT
GGTTGGAGGCTTGATGTTGCAAATGAAATAGATCATCATTTTTGGAGAAAATTTAGGGAGATTGTGAAAAAAGCGAAGCA
TGATGCTATAATTGTCGGTGAGGTTATGCATGATGCGTCACCTTGGCTTTATGGTGATCAGTTTGATAGTGTCATGAATT
ATCCTTTTAAGAATGCTCTTGTTGACTTTTTTGCAAAGAGAAGCATAGATGCAAAGCGATTTAACACTATTATGACTGAA
CAATTGATGAGGCACATGGATGGTGTTAATAGAGCCATGCTAAACCTAATAGGGAGTCATGATACAGAGAGATTTTTGAC
AATGTGCAATGGCATGGTAATGCGAATGAAGCTGGCTCTTGTATTTCAATTTGCTTATATTGGAGTTCCGTATATATATT
ATGGGGATGAAGTTGGTATGGTTGGTGGATATGACCCTGATTGCAGAAGATGTATGATTTGGGACGAAGAAAAACAAAAC
TTGAAGTTATTCAATTTTTATAAAAGGCTTATTTCTTTGAGAAAGGAAAATGAAGAACTAAGATATGGAACATATAAAAC
ACTATATGCAAAAGATGGAGTTATAAGTTTCAAAAGGGAATACAAAGGTAAATCGATTATTGTGATAATAAATAATAGCA
GCAAAGAGAACTCAATATTGTTAAATGGCATACAAGGAAAGGCAGATATTTTAGGAATGGGCAAGATAAAGATAAGGGGT
AAAATTATATCATTAGAGCCAAACTGTGCCTATATTCTAAAATAA

Protein sequence :
MIRQAIYHKSDVPFAYPLNKDELHIVLRTASTDIKRCYIFYRDRYDWMGKFKVKEMFLTQSNELFDYYVTTLKLNKKFVY
FFYLISMKDERVYYTESGFYEEKPENSFHGFFQFPYICDMDVFFAPKWTSDCIVYQIFPDRFNNGDKSNDPENVRPWGER
PGPTTFFGGDIQGIIDKIEYLKELGINAIYMTPIFLSPSTHKYNTTDYYKIDPHFGDTQKAKELIDKCHKNEIRVIFDAV
FNHCGYDFFAFQDVIKNGKDSKYWDWFNVYEWPIKTTPLPSYEAFADHEWRMPKLMTKNPDVQEYLLNVAEYWIKEVGID
GWRLDVANEIDHHFWRKFREIVKKAKHDAIIVGEVMHDASPWLYGDQFDSVMNYPFKNALVDFFAKRSIDAKRFNTIMTE
QLMRHMDGVNRAMLNLIGSHDTERFLTMCNGMVMRMKLALVFQFAYIGVPYIYYGDEVGMVGGYDPDCRRCMIWDEEKQN
LKLFNFYKRLISLRKENEELRYGTYKTLYAKDGVISFKREYKGKSIIVIINNSSKENSILLNGIQGKADILGMGKIKIRG
KIISLEPNCAYILK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09660 YP_002510949.1 alpha-amylase Not tested PPI-1 Protein 8e-94 41