Gene Information

Name : YSA_00198 (YSA_00198)
Accession : YP_006383996.1
Strain : Pseudomonas putida ND6
Genome accession: NC_017986
Putative virulence/resistance : Virulence
Product : redoxin domain-containing protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 102405 - 102905 bp
Length : 501 bp
Strand : -
Note : -

DNA sequence : 
ATGGCTCAAGTGACTCTCAAAGGCAACCCGGTCCAGGTCAACGGTAACCTGCCACAGGCCGGCGCCCAGGCTCCGGCTTT
CTCCCTGGTAGGTGAAGGCCTGGCTGACAAGTCGCTGAAAGACTACGCCGGCAAGCGCAAGGTGCTGAATATCTTCCCAA
GCGTCGATACCCCGACCTGCGCCACCTCGGTGCGCAAGTTCAACGCCCAGGCCAACGACGTCGCCAACACCGTGGTGCTG
TGCATCTCGGCTGACCTGCCGTTCGCCCAGGCACGTTTCTGCGGCGCCGAAGGGCTGGACAATGTGAAGAACCTGTCGAC
CCTGCGTGGCCGCGAGTTCCTCGAGAACTACGGCGTAGCCATCGCCGACGGCCCGCTGGCCGGCCTGGCCGCCCGCGCCG
TGGTGGTGCTGGACGAGAACGACAAGGTGCTGCACAGCGAACTGGTTGGCGAAATTGCTGACGAGCCGAACTACGACGCG
GCGCTGGCTGTACTGAAGTAA

Protein sequence : 
MAQVTLKGNPVQVNGNLPQAGAQAPAFSLVGEGLADKSLKDYAGKRKVLNIFPSVDTPTCATSVRKFNAQANDVANTVVL
CISADLPFAQARFCGAEGLDNVKNLSTLRGREFLENYGVAIADGPLAGLAARAVVVLDENDKVLHSELVGEIADEPNYDA
ALAVLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 4e-30 48
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 6e-30 48
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 4e-30 47
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 6e-30 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YSA_00198 YP_006383996.1 redoxin domain-containing protein VFG0087 Protein 2e-30 48