Gene Information

Name : YSA_01469 (YSA_01469)
Accession : YP_006384688.1
Strain : Pseudomonas putida ND6
Genome accession: NC_017986
Putative virulence/resistance : Resistance
Product : lipoprotein releasing system, ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 760404 - 761087 bp
Length : 684 bp
Strand : -
Note : -

DNA sequence : 
ATGAGTGATAAAGCCGTTCTGAGTTGCCGCAACCTGGGCAAGTCCTACGACGAGGGCCCGGAGTCGGTGCAGGTGCTGTC
CGGGCTCAACCTGGAACTGCAGGCCGGTGAGCGGGTGGCCATCGTTGGCAGTTCCGGCTCGGGCAAGAGTACCTTGCTCA
ACCTGCTGGGCGGCCTCGACCGGCCGACCCAGGGTAGCGTGTGGCTGGCTGGCGAAGAGCTGTCGGCACTGGGCGAGCGT
GCCCGTGGCCTGCTACGCAACCGCGAGTTGGGCTTTGTCTACCAGTTCCACCACCTGCTGCCGGAATTCACCGCCATCGA
GAACGTGTGCATGCCGCTGCTGATCGGCCGAACGCCCATCCCCGAGGCCCGGGAGCGTGCCGAGGCGCTGCTCAAGCGGG
TAGGCCTGGGCCACCGCCTGAACCACAAGCCGGCCGAGCTTTCCGGCGGCGAACGCCAGCGTGTGGCGATCGCCCGGGCG
CTGGTCAACCGCCCCGGCCTGGTGATGCTCGACGAGCCGACCGGTAACCTCGACCACCATACCGCCCAAGGCATCCAGGA
ACTGATGCAGGAGCTGTCCAGCGCTTCGCGCACGGCATTCCTGGTGGTCACCCACGACCTCAACCTGGCGCGGCAGATGG
ACCGTGTGCTGAAGCTCGACGATGGCCACCTGGTGGCCATCTGA

Protein sequence : 
MSDKAVLSCRNLGKSYDEGPESVQVLSGLNLELQAGERVAIVGSSGSGKSTLLNLLGGLDRPTQGSVWLAGEELSALGER
ARGLLRNRELGFVYQFHHLLPEFTAIENVCMPLLIGRTPIPEARERAEALLKRVGLGHRLNHKPAELSGGERQRVAIARA
LVNRPGLVMLDEPTGNLDHHTAQGIQELMQELSSASRTAFLVVTHDLNLARQMDRVLKLDDGHLVAI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-27 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-28 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-28 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-28 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YSA_01469 YP_006384688.1 lipoprotein releasing system, ATP-binding protein NC_012469.1.7686878. Protein 2e-38 45
YSA_01469 YP_006384688.1 lipoprotein releasing system, ATP-binding protein NC_008702.1.4606598. Protein 2e-36 45