Gene Information

Name : YSA_01192 (YSA_01192)
Accession : YP_006384541.1
Strain : Pseudomonas putida ND6
Genome accession: NC_017986
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 615072 - 615758 bp
Length : 687 bp
Strand : +
Note : -

DNA sequence : 
ATGAGCCCCAGCATTCTCGTTGCGCAGAACCTTAGCAAAGTGGTCCCCAGCGCGGAAGGTGACCTTACCATCCTCCACGC
ACTGTCTCTCGACCTGGCCCAAGGCGATAGCCTGGCCATCGTCGGCGCCTCGGGCTCTGGCAAATCGACCCTGCTCGGCT
TGCTCGCCGGCCTCGACCGCCCCAGCGCTGGCAATGTCGTGCTCGCCGGCCACGACCTGGGGCCACTGGATGAAGACCAA
CGCGCCCGTGTGCGCGCCGAACATGTGGGTTTCGTGTTCCAGTCGTTCCAGCTGCTCGACAGCCTCAATGCACTGGAAAA
CGTCATGCTGCCACTGGAGCTGGACGGCCGCCGCGATGCCCGCGAACAGGCTCGCACTTTGCTGGAGCGGGTCGGCCTGG
GCAAGCGCCTGAGCCACACACCTCGGCAGCTGTCGGGCGGCGAGCAGCAGCGCGTGGCAATCGCCCGCGCCTTCGCCGCG
CAGCCTGCGGTGCTGTTCGCCGATGAGCCCACCGGCAACCTCGACAGCCACACCGGCGAACGCATCAGCGACTTGTTGTT
CGAGCTGAACAAGGAGCGCGGCACTACCTTGGTGCTGGTCACCCATGACGAACGCCTGGCCCGCCGCTGCCGGCGCCAGA
TCCGCCTGGACGCGGGCCGCCTTGTGGCGCCGACGGAGGCCCGGTGA

Protein sequence : 
MSPSILVAQNLSKVVPSAEGDLTILHALSLDLAQGDSLAIVGASGSGKSTLLGLLAGLDRPSAGNVVLAGHDLGPLDEDQ
RARVRAEHVGFVFQSFQLLDSLNALENVMLPLELDGRRDAREQARTLLERVGLGKRLSHTPRQLSGGEQQRVAIARAFAA
QPAVLFADEPTGNLDSHTGERISDLLFELNKERGTTLVLVTHDERLARRCRRQIRLDAGRLVAPTEAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-23 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-23 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-23 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-23 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YSA_01192 YP_006384541.1 ABC transporter-like protein NC_008702.1.4606598. Protein 6e-30 51
YSA_01192 YP_006384541.1 ABC transporter-like protein NC_012469.1.7686878. Protein 2e-32 47