Gene Information

Name : YSA_11235 (YSA_11235)
Accession : YP_006389980.1
Strain : Pseudomonas putida ND6
Genome accession: NC_017986
Putative virulence/resistance : Virulence
Product : general secretion pathway protein G
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5999156 - 5999626 bp
Length : 471 bp
Strand : +
Note : -

DNA sequence : 
ATGGTGCATGTCAACGCTTGTCCCCATGCAGTGGAGGGTTTCACCATGCAGCGCAGAACCAACCCGCAACGTGGCTTCAC
TCTGCTTGAACTCCTGGTGGTACTGGTAGTACTCGGCCTGCTGGCCGGCATCGTCGCCCCCAAGTACTTCAGTCAGCTAG
GCCGCTCCGAGGCCAAGGTTGCGCGGGCGCAGATCGAGGGGCTGAGCAAGGCCCTGGACTTGTACCGTCTGGAGGTCGGC
CACTACCCCAACAGCGAACAAGGCTTGCAGGCGCTGGTGGTCGCGCCCAGTGGCGAGGCTCGCTGGACCGGCCCGTACCT
GCAGAAGGCCGTGCCGCAAGACCCGTGGGGCCGCCCTTATATCTACCGGCAACCTGGCGAGAACGGCGGTGAGTACGACC
TGCTGTCGATGGGCAAGGACGGCCAGCCGGGTGGCGATGGCGAAAATGCCGAAGTTACCAGCTGGCAGTAA

Protein sequence : 
MVHVNACPHAVEGFTMQRRTNPQRGFTLLELLVVLVVLGLLAGIVAPKYFSQLGRSEAKVARAQIEGLSKALDLYRLEVG
HYPNSEQGLQALVVAPSGEARWTGPYLQKAVPQDPWGRPYIYRQPGENGGEYDLLSMGKDGQPGGDGENAEVTSWQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 2e-19 42
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 1e-19 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YSA_11235 YP_006389980.1 general secretion pathway protein G VFG1871 Protein 1e-18 44
YSA_11235 YP_006389980.1 general secretion pathway protein G VFG0180 Protein 3e-19 43
YSA_11235 YP_006389980.1 general secretion pathway protein G VFG2050 Protein 4e-20 42