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Name : YSA_11160 (YSA_11160) Accession : YP_006389937.1 Strain : Pseudomonas putida ND6 Genome accession: NC_017986 Putative virulence/resistance : Unknown Product : Rhs element Vgr protein Function : - COG functional category : - COG ID : - EC number : - Position : 5956770 - 5958947 bp Length : 2178 bp Strand : + Note : - DNA sequence : ATGCCCAGCCAATCCGATCTGCGCTTCACTTTCCAGCCGCTGGTTGGCCGAAGCGAGTTTGAGGTGGTGTCGTTCGAACT GGACGAAGCCATCAGCTCACCGTTCCGGCTGCAGCTGGAGCTGATCAGCTTCGAAGACGATGTCGACTTCGGCCAGCTGC TCGACAAACCGGTGCTGTTTACCCTCTGGCAGGGTGAGCGCCCGTTGCGCTACGTGCACGGCCTGGTCAGCACCTTCAGC CAGGGTGAAACAGGCTTCCATCGCACCCGTTACCGCGCACTGGTCGAGCCCATGCTGGCCCGCGCCGGGCTGCGCTCGAA CTGGCGCATCTTCCAGCAGAAAACCGTGCCGCAGATTCTCGAGATCATGCTCAAACGCCAAGGCGTGAATGCCTACGAGC TGAAGTGTCTCGACCCGCATCAGGTGCGCGAATTTTGCGTGCAGGCCGGTGAAACAGACCTCGACTTCATGGCCCGCCTG GCCGCCGAGGAAGGCATTGTCTACCGCTTCGAACACACGCCGAAACAGCACTTGCTGGTCATCACTGACCGGCTGCTGGC GCTGGGGCAGATCAGCCGGGGCGCCATCAAGACCCATGATGAGGATGAAGGGTTTCACAATGACGACGTGGGCCCCGATC AGGTGCTGTACCGATCCGTTGGAGGCGGCGATCAGGCCAGGCCTTGCCTGCGGCGCTTGCGTTACAGCGAACAGGTGCGA ACAGCGCGGCAGGTGCAACGGGACTACACCTTCACTCACCCACAATACCGTCAGGAACACCAGGCGTACGACAATAGCAA CACCCATCAATCGCTGAACTATGAGCGCTTCGACTACCCCGGCCGATACAAGCGTGATGCGGTCGGGGTTCCGTTCACTG CCACCCGCCTCACGGCCCTGCGCCATGATGCACGCATTGCCGAAGTGGAAGGCGACGATGTGCGCCTGCAACCGGGGCTG AGCTTCACCCTCATCGAGCACCCGCGTGAAGACCTCAACGTGCACTGGCGCACGGTCAGCGTGCATCACGAAGGCACCCA GTTCACCAGCCTGCAGGAAGAGGCCGCCGGCTCGCAGCAAGGCACCCGCTACAAACAGGACGCATTGCTGGTTCCCGGCA GGGCCGAATGGCGCCCGCCCCCCCTGCCCAAGCCACGCATTGACGGCCCGCACATGGCGACGGTGGTCGGGCCCAAGGGC GAGGAAATCTATTGCGACCAATGGGGCCGCGTGAAAGTGAGCTTTCCTTGGGACCGGGAAAGCGAAAACAACGAGTTCAG CTCCTGCTGGGTGCGCGTGTCGCAAGGTTGGGCGGGGGGCAGCTGGGGTTCGATGGCCATCCCGCGCATCGGCCAGGATG TGATCATCCAGTACGTCAACGCCGACCCGGACCAGCCGATGATCACCGGGCGCACCTATTGCGGTAACCAGTTGCCGCCC TATGACCTGCCCGAGCACAAGACGCGCATGACCATCAAGAGCCAGACCCATAAAGGCGAAGGCTTCAACGAGCTGCGCTT CGAGGATGAACTGGGTCGGCAGGAGGTGTTCATTCATGCCGAGCGGGACCAGAACAACATCGTCAAGCACGACGAAACCA CACGCGTGGGTAACGACCGTACCGAACGCGTCGAACGAGACGAAACGATTTCGATCGGTCAGGACCGTCGCGAAGACATC GCCCGTGACGAATCTGTTGGCATCGGCCAGAACCGGGTACACGAAATCGGCAACGACGACAGCCTGAGCATCGGCCGCAA CCACAGGATCACCACAGGCAAGGATCGAATCGAACAGGTAGGGAACCACCGGCAGGACATCACCAAGGCAAACCACACAG TAGAAATCGGCGGCCACCTCGAACAGGTCGTTGCCGGTCACAGCACGTTGCAAACGGGCGAAGCCATCCGGCACACCACC AAGGTTTATGACATCCAGGTCAGCGAAAGCCTGACGATCCGCAGCCCCGCGGGGCTTCTGAGAGTCGACGGCGCCGGTAT CACGCTGGACGGCCTGGCGCTGGCCTTCAAAGGGCCTGTCAGCCAGCAGGCTACGGGTAGCAATCGCGTCACTTCAACGT CTGGCGTACCGGCGCCGGGCGAACCCATTTGCCTCAGCTGCCTGCTCAAAGCGATCGCCGACGGCCACACCATCATTCGC ATGGAAGGAGCAAGCTGA Protein sequence : MPSQSDLRFTFQPLVGRSEFEVVSFELDEAISSPFRLQLELISFEDDVDFGQLLDKPVLFTLWQGERPLRYVHGLVSTFS QGETGFHRTRYRALVEPMLARAGLRSNWRIFQQKTVPQILEIMLKRQGVNAYELKCLDPHQVREFCVQAGETDLDFMARL AAEEGIVYRFEHTPKQHLLVITDRLLALGQISRGAIKTHDEDEGFHNDDVGPDQVLYRSVGGGDQARPCLRRLRYSEQVR TARQVQRDYTFTHPQYRQEHQAYDNSNTHQSLNYERFDYPGRYKRDAVGVPFTATRLTALRHDARIAEVEGDDVRLQPGL SFTLIEHPREDLNVHWRTVSVHHEGTQFTSLQEEAAGSQQGTRYKQDALLVPGRAEWRPPPLPKPRIDGPHMATVVGPKG EEIYCDQWGRVKVSFPWDRESENNEFSSCWVRVSQGWAGGSWGSMAIPRIGQDVIIQYVNADPDQPMITGRTYCGNQLPP YDLPEHKTRMTIKSQTHKGEGFNELRFEDELGRQEVFIHAERDQNNIVKHDETTRVGNDRTERVERDETISIGQDRREDI ARDESVGIGQNRVHEIGNDDSLSIGRNHRITTGKDRIEQVGNHRQDITKANHTVEIGGHLEQVVAGHSTLQTGEAIRHTT KVYDIQVSESLTIRSPAGLLRVDGAGITLDGLALAFKGPVSQQATGSNRVTSTSGVPAPGEPICLSCLLKAIADGHTIIR MEGAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| vgrG | AAN64196.1 | VgrG | Not tested | macrophage toxin pathogenicity island | Protein | 2e-112 | 42 |
