Gene Information

Name : YSA_00124 (YSA_00124)
Accession : YP_006383961.1
Strain : Pseudomonas putida ND6
Genome accession: NC_017986
Putative virulence/resistance : Unknown
Product : Na+/H+ antiporter NhaC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 58857 - 60176 bp
Length : 1320 bp
Strand : -
Note : -

DNA sequence :
ATGAATGCAGTGATCGCCGCGGTCGGCATCATGCTGATACTCAGCCTGTCCCGCGTGCACGTGGTCATCGCCCTGATCAT
CGGCGCCCTGGCCGGTGGGCTGGTGGGCGGCCTGGGCATCGAAGGCACGCTCAAGGCCTTCAACGGTGGCCTCGGCGGTG
GTGCCACGGTGGCTTTGTCCTATGCACTGCTGGGTGCCTTTGCCGTGGCAATCGCCAAGTCTGGCCTGGCCCATGCGCTG
GCCGACCGCGCCCTGGTCATGATCGACCGGCAGGACGACGCCAAGGGCGGCAAGGTCAAATGGCTGATGATCGGCCTGAT
GCTGGTGGTGGCCGTGTCGTCCCAGAACATCCTGCCTATCCACATTGCCTTCATCCCGCTGCTGGTGCCACCTCTGTTGT
ACGTGCTGACTCGCCTGCGTATCGACCGCCGGCTGATCGCCTGTGTGATCACCTTTGGCCTGATCACCCCGTACATGTTC
CTGCCGGTGGGCTTCGGCAACATCTTCCTCAACGAGATCCTGTTGGCCAATGTGGCCCGCGCGGGTGTCGATGTGAGCGG
CGTCAACGTCACCCACGCCATGGCCGTCCCGGCTGCCGGCATGCTCGTCGGCCTGCTGGTGGCGGTGTTCATCAGCTACC
GCAAGAAGCGTGACTACGACCTGGCGCGGATCCAGCAGGTGGAGCAGGTGAGCGTGCAGTACAACCCGCTGACCTTGCTG
GTGGCCGGGCTGGCGATCGCTGCAGCCTTCATTGTCCAGCTGTTGCTGGACTCGATGATCATCGGTGCCATGGTCGGTTT
CCTGATCTTCTCGCTGTCGGGCATCGTCAAGTGGAAAGAGACCGACGACCTGTTCACCGAAGGCATGAAGATGATGGCCA
TGATCGGTTTCATCATGATTACCGCGTCCGGTTTTGCCGAGGTGATGAAGGCCACCGGTGAGGTGAAGAGCCTGGTGGAA
ACCTCGGCGCAGTGGATCGACCACAGCAAGGGCGTCGGTGCCCTGCTGATGCTGTTGGTAGGCCTTTTGGTGACGATGGG
GATCGGCTCGTCGTTCTCCACCGTGCCGATCCTGGCGGCGATTTTCGTGCCACTGTGCGTACAACTGGGCTTCGACCCGT
TGGCCACGGTGTGCATCATTGGTACTGCCGGTGCGCTGGGTGATGCAGGTTCGCCGGCCTCGGACTCGACCCTGGGCCCG
ACCTCGGGCCTGAACGTGGATGGCCAGCACCACCACATCTGGGACACCGTGGTGCCGACCTTCATCCATTACAACCTGCC
GCTGCTGGCGTTCGGTTGGTTGGCGGCGATGACCTTGTAA

Protein sequence :
MNAVIAAVGIMLILSLSRVHVVIALIIGALAGGLVGGLGIEGTLKAFNGGLGGGATVALSYALLGAFAVAIAKSGLAHAL
ADRALVMIDRQDDAKGGKVKWLMIGLMLVVAVSSQNILPIHIAFIPLLVPPLLYVLTRLRIDRRLIACVITFGLITPYMF
LPVGFGNIFLNEILLANVARAGVDVSGVNVTHAMAVPAAGMLVGLLVAVFISYRKKRDYDLARIQQVEQVSVQYNPLTLL
VAGLAIAAAFIVQLLLDSMIIGAMVGFLIFSLSGIVKWKETDDLFTEGMKMMAMIGFIMITASGFAEVMKATGEVKSLVE
TSAQWIDHSKGVGALLMLLVGLLVTMGIGSSFSTVPILAAIFVPLCVQLGFDPLATVCIIGTAGALGDAGSPASDSTLGP
TSGLNVDGQHHHIWDTVVPTFIHYNLPLLAFGWLAAMTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpI19_1481 YP_005685924.1 Na+/H+ antiporter NhaC Not tested PiCp 5 Protein 2e-99 59
Cp1002_1472 YP_005681739.1 Na+/H+ antiporter NhaC Not tested PiCp 5 Protein 2e-99 59
cpfrc_01481 YP_003783881.1 hypothetical protein Not tested PiCp 5 Protein 2e-99 59
CpC231_1474 YP_005683838.1 Na+/H+ antiporter NhaC Not tested PiCp 5 Protein 2e-99 59
BJAB07104_00352 YP_008207817.1 putative permease Not tested AbaR25 Protein 8e-92 52
BJAB0868_00356 YP_008211682.1 putative permease Not tested AbaR26 Protein 8e-92 52